RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 C5orf52A6NGY3 159 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 hCG_2039718K7EN88 272 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 GPR171O14626 319 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 KHDRBS3O75525 346 aaKnown RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 AMBPP02760 352 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 GPIP06744 558 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 RPS17P08708 135 aaKnown RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 CECR9P0C854 216 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 PATE4P0C8F1 98 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 SPP1P10451 314 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 GNB3P16520 340 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 MDKP21741 143 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 FRKP42685 505 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 GPR6P46095 362 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 CDX1P47902 265 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 EVX1P49640 407 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 CCNG1P51959 295 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 TMEM33P57088 247 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 KRTAP10-3P60369 221 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 PRPS1P60891 318 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 MYBPC1Q00872 1141 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 ZP4Q12836 540 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 TRAP1Q12931 704 aaKnown RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 IFT88Q13099 833 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 GTDC1Q4AE62 458 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.95□□□□□ -1.78
COPS3-204ENST00000462236 TSPO2Q5TGU0 170 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 LCN1P1Q5VSP4 162 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 AP1ARQ63HQ0 302 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 C3orf33Q6P1S2 294 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 FAHD2BQ6P2I3 314 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 SHQ1Q6PI26 577 aaKnown RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 TMEM107Q6UX40 140 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 CCDC91Q7Z6B0 441 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 NRARPQ7Z6K4 114 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 OR8H3Q8N146 312 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 RIBC1Q8N443 379 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 SIGLECL1Q8N7X8 197 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 CEP112Q8N8E3 955 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 FBXO36Q8NEA4 188 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 OR4F15Q8NGB8 312 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 OR4F6Q8NGB9 312 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 FBXO30Q8TB52 745 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 NANPQ8TBE9 248 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 MAGEE2Q8TD90 523 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 NSMAFQ92636 917 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 TAF15Q92804 592 aaKnown RBP eCLIP3.95□□□□□ -1.78
COPS3-204ENST00000462236 FAHD2AQ96GK7 314 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 SH3YL1Q96HL8 342 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 MS4A14Q96JA4 679 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 AMDHD1Q96NU7 426 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 ASCL2Q99929 193 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 THUMPD3Q9BV44 507 aaKnown RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 C3orf14Q9HBI5 128 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 LPAR2Q9HBW0 351 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 UBQLN4Q9NRR5 601 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 ZNF275Q9NSD4 429 aaPredicted RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 TREM2Q9NZC2 230 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 EMC3Q9P0I2 261 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 VPS29Q9UBQ0 182 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 GAB2Q9UQC2 676 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 NOSIPQ9Y314 301 aaKnown RBP3.95□□□□□ -1.78
COPS3-204ENST00000462236 ANGPTL3Q9Y5C1 460 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 FLVCR1Q9Y5Y0 555 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 PPIAL4EA0A075B759 164 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 A0A087WYN8 130 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 PPIAL4CA0A0B4J2A2 164 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 IGHV2OR16-5A0A0B4J2B6 119 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 A0A0G2JMP0 313 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 A0A0X1KG70 313 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 A0A1B0GUS0 222 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 A0A1W2PPW3 197 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 TCRBV9S1A1TA0A576 114 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 MSGN1A6NI15 193 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 PPIAL4DF5H284 164 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 SHOX2O60902 331 aaPredicted RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 MRPL33O75394 65 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 KLHL2O95198 593 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 NGFP01138 241 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 IGHV2-5P01817 119 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 PPIAL4FP0DN26 164 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 GFAPP14136 432 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 AZGP1P25311 298 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 CRABP2P29373 138 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 SSTR1P30872 391 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 TIA1P31483 386 aaKnown RBP eCLIP3.94□□□□□ -1.78
COPS3-204ENST00000462236 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 RBMXP38159 391 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 RFX3P48380 749 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 NCBP2P52298 156 aaKnown RBP eCLIP3.94□□□□□ -1.78
COPS3-204ENST00000462236 MTCP1P56278 107 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 GNB1P62873 340 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 IL1RL1Q01638 556 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 TGFBR3Q03167 851 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 PDIA2Q13087 525 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 SLC17A1Q14916 467 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 HEPACAMQ14CZ8 416 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 SLC9A3R2Q15599 337 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms