RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CBLP22681 906 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CPT2P23786 658 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 EEF1B2P24534 225 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 DNASE1P24855 282 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MAPK3P27361 379 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 TLX1P31314 330 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CHRNA7P36544 502 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 NCBP2P52298 156 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 FOXG1P55316 489 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CLDN8P56748 225 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 KCNK10P57789 538 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 PMP22Q01453 160 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SNTB1Q13884 538 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 PDE7AQ13946 482 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CTF1Q16619 201 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 C2orf68Q2NKX9 166 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 FAM174BQ3ZCQ3 159 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CHRFAM7AQ494W8 412 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF404Q494X3 552 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 PAN3Q58A45 887 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 PIGGQ5H8A4 983 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 FHL5Q5TD97 284 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 LIPNQ5VXI9 398 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SPINK14Q6IE38 97 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 HIST3H2AQ7L7L0 130 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 LINGO2Q7L985 606 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 NUP54Q7Z3B4 507 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MRPL52Q86TS9 123 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 TPRA1Q86W33 373 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CCDC71Q8IV32 467 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 DEFB107AQ8IZN7 70 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 RDH10Q8IZV5 341 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 C12orf45Q8N5I9 185 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 LRRC17Q8N6Y2 441 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 RBMXL3Q8N7X1 1067 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF615Q8N8J6 731 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 B3GNT7Q8NFL0 401 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 BPIFB6Q8NFQ5 453 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 OR52R1Q8NGF1 315 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 AKR7LQ8NHP1 331 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MOSPD2Q8NHP6 518 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 NANPQ8TBE9 248 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 APOBEC4Q8WW27 367 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MOAP1Q96BY2 351 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 PPCDCQ96CD2 204 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ASB9Q96DX5 294 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 RRNAD1Q96FB5 475 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 AURKBQ96GD4 344 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 AMDHD1Q96NU7 426 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SIGLEC12Q96PQ1 595 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 TRNT1Q96Q11 434 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 LPAR4Q99677 370 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 PKP2Q99959 881 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF559Q9BR84 538 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MRPL37Q9BZE1 423 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 GAL3ST2Q9H3Q3 398 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 FN3KQ9H479 309 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ANKRD19PQ9H560 264 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 KAT8Q9H7Z6 458 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 COQ10BQ9H8M1 238 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 WDR41Q9HAD4 459 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ADAP2Q9NPF8 381 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MIEF1Q9NQG6 463 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ABCB10Q9NRK6 738 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM45AQ9NWC5 275 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 FLRT3Q9NZU0 649 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 ARMCX1Q9P291 453 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MIOXQ9UGB7 285 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 OSGIN1Q9UJX0 560 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 NXT1Q9UKK6 140 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MRPS33Q9Y291 106 aaKnown RBP4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MMACHCQ9Y4U1 282 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 MAB21L2Q9Y586 359 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 KCNE3Q9Y6H6 103 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 CLCA3PQ9Y6N3 262 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 SPACA6W5XKT8 324 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 NCKAP5O14513 1909 aa4.26□□□□□ -1.73
ATPAF1-203ENST00000460928 EXPH5Q8NEV8 1989 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HIVEP3Q5T1R4 2406 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 TRBV5-3A0A0A0MS03 114 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NPIPA5A0A0B4J1W7 369 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 C2orf92A0A1B0GVN3 265 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 TCRBV3S1A0A5B6 114 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 PINLYPA6NC86 204 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NPIPA7E9PJI5 369 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DNASE2O00115 360 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 UPK1AO00322 258 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NR5A2O00482 541 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 UBDO15205 165 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 CFLARO15519 480 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 OGG1O15527 345 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SCN2BO60939 215 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC22A3O75751 556 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 EIF3GO75821 320 aaKnown RBP eCLIP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 CEACAM4O75871 244 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 OR2J2O76002 312 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 KRT33AO76009 404 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 LALBAP00709 142 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 IGKV1D-16P01601 117 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms