RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 SYS1Q8N2H4 156 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 GJC3Q8NFK1 279 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 OR1F12Q8NHA8 337 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 LILRB1Q8NHL6 650 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 ST7LQ8TDW4 575 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 SLC7A6Q92536 515 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 AMELYQ99218 206 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 C1orf198Q9H425 327 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 KLHDC2Q9Y2U9 406 aa11.28□□□□□ -0.6
VPS33A-202ENST00000451053 UTP20O75691 2785 aaKnown RBP11.28□□□□□ -0.6
VPS33A-202ENST00000451053 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 C5orf49A4QMS7 147 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 SULT1C4O75897 302 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 PTHP01270 115 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 KRT8P05787 483 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 COX5BP10606 129 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 TTKP33981 857 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 GDI2P50395 445 aaKnown RBP11.27□□□□□ -0.61
VPS33A-202ENST00000451053 HGFACQ04756 655 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 TBC1D28Q2M2D7 210 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 CDONQ4KMG0 1287 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 XAF1Q6GPH4 301 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 DEGS2Q6QHC5 323 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF322Q6U7Q0 402 aaPredicted RBP11.27□□□□□ -0.61
VPS33A-202ENST00000451053 SPATC1Q76KD6 591 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 RHOUQ7L0Q8 258 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 THEM6Q8WUY1 208 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 MUL1Q969V5 352 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 HDHD2Q9H0R4 259 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 CDH20Q9HBT6 801 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 ISYNA1Q9NPH2 558 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 BATF3Q9NR55 127 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 CLEC2DQ9UHP7 191 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 COPS3Q9UNS2 423 aa11.27□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF254O75437 659 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 TFAP2AP05549 437 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 ADRA2AP08913 450 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 DBHP09172 617 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 CCNOP22674 350 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 PSMB9P28065 219 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 WNT5AP41221 380 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 ALDH3B2P48448 385 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 TAS2R43P59537 309 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 KRTAP10-9P60411 292 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 BDH1Q02338 343 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 ROM1Q03395 351 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 RSPO1Q2MKA7 263 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-202ENST00000451053 SYT6Q5T7P8 510 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-202ENST00000451053 GPR141Q7Z602 305 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 KRT77Q7Z794 578 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 RFLNBQ8N5W9 214 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 IL17RDQ8NFM7 739 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 OR1J2Q8NGS2 313 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 AKAP1Q92667 903 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS33A-202ENST00000451053 SLAMF6Q96DU3 332 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 COG8Q96MW5 612 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 OR8B4Q96RC9 309 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 COQ7Q99807 217 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 ATF6BQ99941 703 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF649Q9BS31 505 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 MROQ9BYG7 248 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 TTTY10Q9BZA0 68 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 TRIM36Q9NQ86 728 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 POU2F3Q9UKI9 436 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
VPS33A-202ENST00000451053 ATP23Q9Y6H3 246 aa11.26□□□□□ -0.61
VPS33A-202ENST00000451053 METTL15A6NJ78 407 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 PRR32B1ATL7 298 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF878C9JN71 531 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 E7EQL1 145 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 J3QLW9 94 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 LCKP06239 509 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF19P17023 458 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 GBX2P52951 348 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 MLLT11Q13015 90 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-202ENST00000451053 TIGD6Q17RP2 521 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-202ENST00000451053 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF544Q6NX49 715 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 SSX6Q7RTT6 188 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF679Q8IYX0 411 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF101Q8IZC7 436 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 SPRYD4Q8WW59 207 aaPredicted RBP11.25□□□□□ -0.61
VPS33A-202ENST00000451053 C4orf36Q96KX1 117 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 MGLLQ99685 303 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 OR51B6Q9H340 312 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 NIPAL2Q9H841 368 aa11.25□□□□□ -0.61
VPS33A-202ENST00000451053 PLEKHF2Q9H8W4 249 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms