RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CDADC1Q9BWV3 514 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 SIAEQ9HAT2 523 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 TMEM38BQ9NVV0 291 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 ERVK-18Q9QC07 812 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 KCNG2Q9UJ96 466 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 ABCA1O95477 2261 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 ABCA2Q9BZC7 2435 aa14.72□□□□□ -0.05
PRPF40A-204ENST00000450303 CCDC182A6NF36 153 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 XPNPEP2O43895 674 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 OR4A8P0C604 315 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 OR8G3PP0DMU2 310 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 CALRP27797 417 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 THBS4P35443 961 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 EFNA4P52798 201 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 LSM6P62312 80 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 KCNMB1Q16558 191 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 LINC01590Q5TEZ4 76 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 XAF1Q6GPH4 301 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 LAIR2Q6ISS4 152 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 DPPA2Q7Z7J5 298 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 CCDC36Q8IYA8 594 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 OR4F15Q8NGB8 312 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 NANOS1Q8WY41 292 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 ZMYND19Q96E35 227 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 RNFT2Q96EX2 444 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 MS4A3Q96HJ5 214 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 INTS14Q96SY0 518 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 VRK1Q99986 396 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 POLE4Q9NR33 117 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 B3GNT2Q9NY97 397 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 POLR1DQ9Y2S0 133 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 UGT2A1Q9Y4X1 527 aa14.71□□□□□ -0.05
PRPF40A-204ENST00000450303 YLPM1P49750 1951 aaKnown RBP14.71□□□□□ -0.06
PRPF40A-204ENST00000450303 IGHV2OR16-5A0A0B4J2B6 119 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 EFCAB10A6NFE3 127 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 TVP23AA6NH52 213 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 H3BMQ9 156 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 MT-ND2P03891 347 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 PATE4P0C8F1 98 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 DBTP11182 482 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 CDAP32320 146 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 SNRPD2P62316 118 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF91Q05481 1191 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 GGTLC2Q14390 218 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 GSG1Q2KHT4 349 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 FAM27BQ5VT28 67 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF627Q7L945 461 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 SHFQ7M4L6 423 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC22A24Q8N4F4 322 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF511Q8NB15 262 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC26A10Q8NG04 563 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 OR2AJ1Q8NGZ0 328 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 C11orf40Q8WZ69 217 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 FAM168AQ92567 244 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 COG8Q96MW5 612 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 FOXN4Q96NZ1 517 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 SORCS2Q96PQ0 1159 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 CNN2Q99439 309 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 MNTQ99583 582 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 COPS4Q9BT78 406 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 MARCH7Q9H992 704 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 MOV10Q9HCE1 1003 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF224Q9NZL3 707 aa14.7□□□□□ -0.06
PRPF40A-204ENST00000450303 C12orf71A8MTZ7 269 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 B9A039 149 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 FADS2O95864 444 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 F12P00748 615 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 HTR1AP08908 422 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 GAAP10253 952 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 ENTPD1P49961 510 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 DSCR9P59020 149 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 PCBD1P61457 104 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 RAB40BQ12829 278 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 SMN1Q16637 294 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 AHSA2Q719I0 299 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC16A14Q7RTX9 510 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC16A9Q7RTY1 509 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 PRIMA1Q86XR5 153 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 SKA3Q8IX90 412 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 STX19Q8N4C7 294 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 OR51G2Q8NGK0 314 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 OR6N2Q8NGY6 317 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 FGFBP3Q8TAT2 258 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNRF4Q8WWF5 429 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF75AQ96N20 296 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 AMBNQ9NP70 447 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 YAE1D1Q9NRH1 226 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 MRPS18AQ9NVS2 196 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 CNOT2Q9NZN8 540 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 PSORS1C1Q9UIG5 152 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 TMEM14AQ9Y6G1 99 aa14.69□□□□□ -0.06
PRPF40A-204ENST00000450303 A0A096LNT2 108 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF593O00488 134 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 MPZL1O95297 269 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 GPANK1O95872 356 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 TFP02787 698 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 CST2P09228 141 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 SBK2P0C263 348 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 PCMT1P22061 227 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 PSMB9P28065 219 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms