RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ZNF74Q16587 644 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 AGBL4Q5VU57 503 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 FIGLAQ6QHK4 219 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 UNQ6494/PRO21346Q6UXR6 183 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 EIF5A2Q9GZV4 153 aaKnown RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 CNTD2Q9H8S5 307 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 TAF9BQ9HBM6 251 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 RCL1Q9Y2P8 373 aaKnown RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 MRPS23Q9Y3D9 190 aaKnown RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 RFNGQ9Y644 331 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 COLEC10Q9Y6Z7 277 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 PHF3Q92576 2039 aaKnown RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 FRYQ5TBA9 3013 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 CYR61O00622 381 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 HPGDP15428 266 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 PPICP45877 212 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 PPM1FP49593 454 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 RPS15AP62244 130 aaKnown RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 HTRA3P83110 453 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 SGCGQ13326 291 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 ZNHIT3Q15649 155 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 ZNF542PQ5EBM4 170 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 ADGRE4PQ86SQ3 457 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 EXD3Q8N9H8 876 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 WDSUB1Q8N9V3 476 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 APCDD1LQ8NCL9 501 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 ST7LQ8TDW4 575 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 TAAR8Q969N4 342 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 ANKRD9Q96BM1 317 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-204ENST00000438964 BANF2Q9H503 90 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 TMEM100Q9NV29 134 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 FBXO7Q9Y3I1 522 aa11.99□□□□□ -0.49
ACTN1-204ENST00000438964 CXorf65A6NEN9 183 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 SLC17A1Q14916 467 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 ANKRD55Q3KP44 614 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 FAM160A2Q8N612 972 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 OR52N4Q8NGI2 321 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 ZNF587Q96SQ5 575 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 STACQ99469 402 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 EDEM2Q9BV94 578 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 TEX101Q9BY14 249 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 RTN4RQ9BZR6 473 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 MMP25Q9NPA2 562 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 A0A1W2PQU0 124 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 H7C1Q1 480 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 PRPS1P60891 318 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 RASGEF1BQ0VAM2 473 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 BIKQ13323 160 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 CCINQ13939 588 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 OTOSQ8NHW6 89 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 RNF128Q8TEB7 428 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 FGGYQ96C11 551 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 VWCEQ96DN2 955 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 BSCL2Q96G97 398 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 RBM18Q96H35 190 aaKnown RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 PRRT1Q99946 306 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 PIGQQ9BRB3 760 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 GGACTQ9BVM4 153 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 FOXQ1Q9C009 403 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 PRO1933Q9H354 126 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 GDE1Q9NZC3 331 aa11.98□□□□□ -0.49
ACTN1-204ENST00000438964 YBX2Q9Y2T7 364 aaKnown RBP11.98□□□□□ -0.49
ACTN1-204ENST00000438964 SERINC4A6NH21 518 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 NKX2-2O95096 273 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 S100A8P05109 93 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 CTLA4P16410 223 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 S100PP25815 95 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 GDI1P31150 447 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 RPS4XP62701 263 aaKnown RBP11.97□□□□□ -0.49
ACTN1-204ENST00000438964 FMODQ06828 376 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 UNC119Q13432 240 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 ZNF321PQ8N8H1 164 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 RERGQ96A58 199 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-204ENST00000438964 MEGF10Q96KG7 1140 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 LRP12Q9Y561 859 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 LOC107986453A0A1B0GWG9 222 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 F8VVB4 439 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 F8VWA3 439 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 H0YIG0 161 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 RAB27BO00194 218 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 GLRA1P23415 457 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 SP3Q02447 781 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 LPCAT3Q6P1A2 487 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 CLEC18BQ6UXF7 455 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 PGAP1Q75T13 922 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 TGIF2Q9GZN2 237 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 RGCCQ9H4X1 137 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 MRPL22Q9NWU5 206 aaKnown RBP11.97□□□□□ -0.49
ACTN1-204ENST00000438964 GDF2Q9UK05 429 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-204ENST00000438964 ZNF354AO60765 605 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-204ENST00000438964 RENP00797 406 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 SLC2A1P11166 492 aa11.97□□□□□ -0.49
ACTN1-204ENST00000438964 LAP3P28838 519 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms