RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 EMDP50402 254 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 MRPL49Q13405 166 aaKnown RBP14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 GFI1BQ5VTD9 330 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 GRASPQ7Z6J2 395 aaPredicted RBP14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 C1QL4Q86Z23 238 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 SFTPA1Q8IWL2 248 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF417Q8TAU3 575 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 MRGPRDQ8TDS7 321 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 GPR174Q9BXC1 333 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 FRRS1LQ9P0K9 344 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 UPB1Q9UBR1 384 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 TRPM6Q9BX84 2022 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF432O94892 652 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 PMS2P2O95744 297 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 CEACAM5P06731 702 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 CEBPBP17676 345 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR3A1P47881 315 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR2A2Q6IF42 318 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 SLC16A9Q7RTY1 509 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZPLD1Q8TCW7 415 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 PAQR8Q8TEZ7 354 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 CCDC74AQ96AQ1 378 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 TM4SF19Q96DZ7 209 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 A0A087WV48 116 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 AHRRA9YTQ3 701 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PPP1R2P9O14990 202 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 UPK3AO75631 287 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 DRD3P35462 400 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF84P51523 738 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PRICKLE4Q2TBC4 344 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 LINC01590Q5TEZ4 76 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 LEMD1Q68G75 181 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF550Q7Z398 422 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 S100A7AQ86SG5 101 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ACBD4Q8NC06 268 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR1J4Q8NGS1 313 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 RASD2Q96D21 266 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF471Q9BX82 626 aaPredicted RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 TUBA4BQ9H853 241 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CAPN10Q9HC96 672 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 LYRM4Q9HD34 91 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF337Q9Y3M9 751 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 INSL6Q9Y581 213 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SPACA6W5XKT8 324 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SNRNP200O75643 2136 aaKnown RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PRR19A6NJB7 356 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 FAM171A2A8MVW0 826 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 FGF17O60258 216 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CDC14BO60729 498 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CTAG2O75638 210 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 NKX2-2O95096 273 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 GPR75O95800 540 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SOD3P08294 240 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PRSS3P35030 304 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CACUL1Q86Y37 369 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SMARCD2Q92925 531 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PHYHIPLQ96FC7 376 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CHST6Q9GZX3 395 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 C1orf198Q9H425 327 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 DNAJC4Q9NNZ3 241 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CXXC1Q9P0U4 656 aaPredicted RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 TRAV14DV4A0A0A6YYC5 116 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 KANTRA0A1W2PQU2 76 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 VAMP5O95183 116 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SFTA3P0C7M3 94 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 DHPSP49366 369 aaPredicted RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SSBP1Q04837 148 aaKnown RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 HIST2H3PS2Q5TEC6 136 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PLPP4Q5VZY2 271 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ABLIM2Q6H8Q1 611 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 WDR73Q6P4I2 378 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 LEG1Q6P5S2 330 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 KIRREL2Q6UWL6 708 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF813Q6ZN06 617 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 PARGQ86W56 976 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 BEST3Q8N1M1 668 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR2M4Q96R27 311 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR2A5Q96R48 311 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 CBLN4Q9NTU7 201 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 TMEM74BQ9NUR3 256 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 MRM2Q9UI43 246 aaKnown RBP14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 SLC17A4Q9Y2C5 497 aa14.56□□□□□ -0.08
COL4A3BP-204ENST00000405807 TRAV18A0A075B6X5 111 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 IGHEP01854 428 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 CD3DP04234 171 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 MPZP25189 248 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 PRPS1P60891 318 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 AGBL4Q5VU57 503 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 YOD1Q5VVQ6 348 aaPredicted RBP14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 STEAP1BQ6NZ63 245 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 HIST3H2BBQ8N257 126 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 FAM160A2Q8N612 972 aaPredicted RBP14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 URM1Q9BTM9 101 aaKnown RBP14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 COMMD4Q9H0A8 199 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 POFUT1Q9H488 388 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 TRAV8-7A0A075B6U6 113 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF860A6NHJ4 632 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 P2RX6O15547 441 aa14.55□□□□□ -0.08
COL4A3BP-204ENST00000405807 MELTFP08582 738 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms