RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 IFNA6P05013 189 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 CTLA4P16410 223 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 FSTP19883 344 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 RAB5BP61020 215 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 PRTFDC1Q9NRG1 225 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 OR5AC2Q9NZP5 309 aa12.52□□□□□ -0.41
APOB-202ENST00000399256 METTL21EPA6NDL7 271 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 SCDO00767 359 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 ZNF264O43296 627 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 HEXAP06865 529 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 INSM1Q01101 510 aaPredicted RBP12.51□□□□□ -0.41
APOB-202ENST00000399256 NAAAQ02083 359 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 CCINQ13939 588 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 ACKR1Q16570 336 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 SGCAQ16586 387 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 KCTD18Q6PI47 426 aaPredicted RBP12.51□□□□□ -0.41
APOB-202ENST00000399256 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 CNTD2Q9H8S5 307 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 HHLA2Q9UM44 414 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 A0A0A6YYH2 397 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 A6NJ64 397 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 NUDT19A8MXV4 375 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
APOB-202ENST00000399256 ZP2Q05996 745 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.51□□□□□ -0.41
APOB-202ENST00000399256 PHF19Q5T6S3 580 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 SKA3Q8IX90 412 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 PRR22Q8IZ63 422 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 C14orf79Q96F83 325 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 WDR92Q96MX6 357 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 C2orf16Q68DN1 1984 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 DBX1A6NMT0 343 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 F2RL1P55085 397 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 NFATC4Q14934 902 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
APOB-202ENST00000399256 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 CCNL2Q96S94 520 aaPredicted RBP12.51□□□□□ -0.41
APOB-202ENST00000399256 UBQLN4Q9NRR5 601 aa12.51□□□□□ -0.41
APOB-202ENST00000399256 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 TNRC18O15417 2968 aaPredicted RBP12.5□□□□□ -0.41
APOB-202ENST00000399256 RNASEK-C17orf49H0YIS7 233 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 P2RY10O00398 339 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 TO15178 435 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 APODP05090 189 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 RNH1P13489 461 aaKnown RBP12.5□□□□□ -0.41
APOB-202ENST00000399256 LPAR6P43657 344 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 ROM1Q03395 351 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 UNC119Q13432 240 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 SMCO1Q147U7 214 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 PNLIPRP3Q17RR3 467 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 MISPQ8IVT2 679 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 ZNF321PQ8N8H1 164 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 OR2I1PQ8NGU4 316 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 CLCC1Q96S66 551 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 NMES1Q9C002 83 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 PCDHGA1Q9Y5H4 931 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 COL4A2P08572 1712 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 TRBV6-7A0A0A0MS04 114 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 MEGF11A6BM72 1044 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 MBTPS2O43462 519 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 NUDT21O43809 227 aaKnown RBP12.5□□□□□ -0.41
APOB-202ENST00000399256 UTS2O95399 124 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 PI3P19957 117 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 NME2P22392 152 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 PPT1P50897 306 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 CAV2P51636 162 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
APOB-202ENST00000399256 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 CYYR1Q96J86 154 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 LAT2Q9GZY6 243 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 RAB22AQ9UL26 194 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 REV3LO60673 3130 aa12.5□□□□□ -0.41
APOB-202ENST00000399256 IGLV1-36A0A0B4J1U3 117 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 C9JQL5 133 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 LRP3O75074 770 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 MED6O75586 246 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 BGLAPP02818 100 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 S100A9P06702 114 aaKnown RBP12.49□□□□□ -0.41
APOB-202ENST00000399256 CXCR1P25024 350 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 CD80P33681 288 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 ID4P47928 161 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 LINC00346Q8IVM7 164 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 ZNF615Q8N8J6 731 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 OR52N5Q8NH56 324 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 OR51F2Q8NH61 342 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 NIT2Q9NQR4 276 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 CLDN16Q9Y5I7 305 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 MYO9BQ13459 2157 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 SOX1O00570 391 aaPredicted RBP12.49□□□□□ -0.41
APOB-202ENST00000399256 NUDT14O95848 222 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 SERPINA5P05154 406 aa12.49□□□□□ -0.41
APOB-202ENST00000399256 RCC1P18754 421 aaPredicted RBP12.49□□□□□ -0.41
APOB-202ENST00000399256 MPZP25189 248 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms