RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 SYS1Q8N2H4 156 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 FAM71E2Q8N5Q1 922 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 OR10AC1Q8NH08 325 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 SCAMP4Q969E2 229 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 ADGRG7Q96K78 797 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 PRRT1Q99946 306 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 SERINC1Q9NRX5 453 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 LUZP4Q9P127 313 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 CHD3Q12873 2000 aaKnown RBP13.54□□□□□ -0.24
VLDLR-202ENST00000382099 CEP290O15078 2479 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 PLPP1O14494 284 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 F13BP05160 661 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 IRF2P14316 349 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 RBX1P62877 108 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 RAB11BQ15907 218 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 SPRYD7Q5W111 196 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 ZNF101Q8IZC7 436 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 C17orf78Q8N4C9 275 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 ZNF480Q8WV37 535 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 TMEM239Q8WW34 195 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 BPIFA2Q96DR5 249 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 LPAR2Q9HBW0 351 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 FBXL17Q9UF56 701 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
VLDLR-202ENST00000382099 AQP7O14520 342 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 SCGB1D2O95969 90 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 RPLP2P05387 115 aaKnown RBP13.53□□□□□ -0.24
VLDLR-202ENST00000382099 CSF2RAP15509 400 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 TUBG1P23258 451 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 HOXC8P31273 242 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 BTG2P78543 158 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 GVQW1Q8N7I0 195 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 FAM213BQ8TBF2 198 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 MARCH1Q8TCQ1 289 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 WFIKKN1Q96NZ8 548 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 TNFRSF13CQ96RJ3 184 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 OR11A1Q9GZK7 315 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 WDR87Q6ZQQ6 2873 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.53□□□□□ -0.24
VLDLR-202ENST00000382099 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.53□□□□□ -0.24
VLDLR-202ENST00000382099 PEX12O00623 359 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 KLF4O43474 513 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 IL33O95760 270 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 CST4P01036 141 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 CSTBP04080 98 aaKnown RBP13.53□□□□□ -0.24
VLDLR-202ENST00000382099 NPPBP16860 134 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 TBPP20226 339 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 GDI1P31150 447 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 GNRHR2Q96P88 292 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 CLDND1Q9NY35 253 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 V9GYS6 101 aa13.53□□□□□ -0.24
VLDLR-202ENST00000382099 TMEM269A0A1B0GVZ9 245 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 GRM6O15303 877 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 TSPAN6O43657 245 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 AHSA1O95433 338 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 ASGR1P07306 291 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 FCGR2CP31995 323 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 THBS4P35443 961 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 ALDH3B1P43353 468 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 SLC6A9P48067 706 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 CX3CR1P49238 355 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 PTTG1IPP53801 180 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 OR4C11Q6IEV9 310 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 FAM122AQ96E09 287 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 MENTQ9BUN1 341 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 SOCS5O75159 536 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 KLF8O95600 359 aaPredicted RBP13.52□□□□□ -0.24
VLDLR-202ENST00000382099 RPS2P15880 293 aaKnown RBP13.52□□□□□ -0.24
VLDLR-202ENST00000382099 NPY4RP50391 375 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 POLR2HP52434 150 aaKnown RBP13.52□□□□□ -0.24
VLDLR-202ENST00000382099 PMS2P11Q13670 270 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 SLC22A6Q4U2R8 563 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 FJX1Q86VR8 437 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 OR51A4Q8NGJ6 313 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 SHDQ96IW2 340 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 CREBZFQ9NS37 354 aa13.52□□□□□ -0.24
VLDLR-202ENST00000382099 PLXNA4Q9HCM2 1894 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 DUS4LO95620 317 aaKnown RBP13.52□□□□□ -0.25
VLDLR-202ENST00000382099 CD160O95971 181 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 GUSBP08236 651 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 CEACAM8P31997 349 aaPredicted RBP13.52□□□□□ -0.25
VLDLR-202ENST00000382099 PPP1CCP36873 323 aaKnown RBP13.52□□□□□ -0.25
VLDLR-202ENST00000382099 VAMP2P63027 116 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 HAGHQ16775 308 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 OR2L13Q8N349 312 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 COMMD1Q8N668 190 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 OR1N1Q8NGS0 311 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 IL17FQ96PD4 163 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 CMKLR1Q99788 373 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 VPS25Q9BRG1 176 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 NMES1Q9C002 83 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 BCL2L10Q9HD36 194 aa13.52□□□□□ -0.25
VLDLR-202ENST00000382099 A0A1W2PPQ1 181 aa13.51□□□□□ -0.25
VLDLR-202ENST00000382099 C20orf202A1L168 122 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms