RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MRGPRX4Q96LA9 322 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SULT4A1Q9BR01 284 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 VN1R1Q9GZP7 353 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 PBOV1Q9GZY1 135 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 BIN3Q9NQY0 253 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 EDARQ9UNE0 448 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TET1Q8NFU7 2136 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 CD300LBA8K4G0 201 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OGG1O15527 345 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TNFSF14O43557 240 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 CTLA4P16410 223 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 HOXB9P17482 250 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 PRKACAP17612 351 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TOMM34Q15785 309 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
VCAN-202ENST00000342785 ANKRD16Q6P6B7 361 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TEX19Q8NA77 164 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 MARCH1Q8TCQ1 289 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SP7Q8TDD2 431 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 C10orf90Q96M02 699 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 FAM212BQ9NTI7 297 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 LRP12Q9Y561 859 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OR6C76A6NM76 312 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PIAS2O75928 621 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 GPANK1O95872 356 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 SERPINF1P36955 418 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 MFGE8Q08431 387 aaPredicted RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 FUT5Q11128 374 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 TAF9Q16594 264 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 GSG1Q2KHT4 349 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 KMT5CQ86Y97 462 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 SPEM1Q8N4L4 309 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 OR4S1Q8NGB4 309 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 SLAMF9Q96A28 289 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 UBE2ZQ9H832 354 aaPredicted RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 MRM2Q9UI43 246 aaKnown RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 KLF15Q9UIH9 416 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 FOXJ3Q9UPW0 622 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 M0R135 149 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PEA15Q15121 130 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 FAM122BQ7Z309 247 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ABI3BPQ7Z7G0 1075 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ZNF799Q96GE5 643 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 MOB1AQ9H8S9 216 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 FANCFQ9NPI8 374 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 DHHO43323 396 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 IGHV3-9P01782 118 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 TCN2P20062 427 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 C16orf47Q6ZP98 133 aaPredicted RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 NPEPL1Q8NDH3 523 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PSMF1Q92530 271 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 TSPAN32Q96QS1 320 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PIGMQ9H3S5 423 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 DLL4Q9NR61 685 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 GDF2Q9UK05 429 aaPredicted RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 COL11A1P12107 1806 aaPredicted RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 ATAD5Q96QE3 1844 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 SCN10AQ9Y5Y9 1956 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 LTBP1Q14766 1721 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 A0A1W2PQF6 199 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 MCRIP1C9JLW8 97 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 HRH1P35367 487 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ECH1Q13011 328 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 CLLU1Q5K131 121 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 FAM122CQ6P4D5 195 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 C17orf107Q6ZR85 190 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 YRDCQ86U90 279 aaKnown RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 ESX1Q8N693 406 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PPP1R1CQ8WVI7 109 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ST8SIA4Q92187 359 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ENY2Q9NPA8 101 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 IGHV1OR21-1A0A087WYE8 117 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 C5orf67F2Z3F1 127 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 OPRM1P35372 400 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 IKZF1Q13422 519 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 FAM74A1Q5RGS3 127 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 OR1L3Q8NH93 324 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PRSS27Q9BQR3 290 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 VSTM5A8MXK1 200 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 CER1O95813 267 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 HPXP02790 462 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ITGB2P05107 769 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 AVPR2P30518 371 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 PHLDA2Q53GA4 152 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 SEMA6DQ8NFY4 1073 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 SEH1LQ96EE3 360 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ZC3HAV1LQ96H79 300 aaKnown RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 BCO1Q9HAY6 547 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 GPR173Q9NS66 373 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 ICAM5Q9UMF0 924 aa6.48□□□□□ -1.37
VCAN-202ENST00000342785 NOSIPQ9Y314 301 aaKnown RBP6.48□□□□□ -1.37
VCAN-202ENST00000342785 SMCO3A2RU48 225 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 SHISA8B8ZZ34 492 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 D6RAR5 112 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 CXCL3P19876 107 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 SSBP1Q04837 148 aaKnown RBP6.47□□□□□ -1.37
VCAN-202ENST00000342785 EXT1Q16394 746 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 DCAF12Q5T6F0 453 aa6.47□□□□□ -1.37
VCAN-202ENST00000342785 H3F3CQ6NXT2 135 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms