RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 WIPI1Q5MNZ9 446 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-201ENST00000292808 C6orf183Q5T699 404 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 ZNF782Q6ZMW2 699 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-201ENST00000292808 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 OR14L1PQ8NHC6 308 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 ZNF385AQ96PM9 386 aaKnown RBP12.44□□□□□ -0.42
ABCF3-201ENST00000292808 TAS2R4Q9NYW5 299 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 OR52A1Q9UKL2 312 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 SMAD9O15198 467 aaKnown RBP12.44□□□□□ -0.42
ABCF3-201ENST00000292808 ITGA5P08648 1049 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 ITGA3P26006 1051 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 LAP3P28838 519 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 CDAP32320 146 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 EFNB2P52799 333 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 CLDN15P56746 228 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 CLDN17P56750 224 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 TMEM255AQ5JRV8 349 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-201ENST00000292808 LUZP2Q86TE4 346 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
ABCF3-201ENST00000292808 IL22RA1Q8N6P7 574 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 OR13C3Q8NGS6 347 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 G6PC2Q9NQR9 355 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 PLA2G3Q9NZ20 509 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 CYB5R1Q9UHQ9 305 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 NPTNQ9Y639 398 aa12.44□□□□□ -0.42
ABCF3-201ENST00000292808 WDPCPO95876 746 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 CD2P06729 351 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 SUCLG1P53597 346 aaKnown RBP12.43□□□□□ -0.42
ABCF3-201ENST00000292808 SNRPD2P62316 118 aaKnown RBP12.43□□□□□ -0.42
ABCF3-201ENST00000292808 POU4F3Q15319 338 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ABHD17BQ5VST6 288 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 SEZ6L2Q6UXD5 910 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ZIC4Q8N9L1 334 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 GPR137Q96N19 417 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 UTP23Q9BRU9 249 aaKnown RBP12.43□□□□□ -0.42
ABCF3-201ENST00000292808 LHFPL6Q9Y693 200 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ZNF292O60281 2723 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 LOC107986453A0A1B0GWG9 222 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 P2RY10O00398 339 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 LMX1BO60663 402 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 EIF1BO60739 113 aaKnown RBP12.43□□□□□ -0.42
ABCF3-201ENST00000292808 CD37P11049 281 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 POU3F4P49335 361 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 STARP49675 285 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 AIMP2Q13155 320 aaKnown RBP12.43□□□□□ -0.42
ABCF3-201ENST00000292808 RAB11BQ15907 218 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ANKRD16Q6P6B7 361 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 LINC00696Q6ZRV3 163 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 OR2M7Q8NG81 312 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 OR9K2Q8NGE7 335 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 RNF133Q8WVZ7 376 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 SLAMF6Q96DU3 332 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 MED30Q96HR3 178 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 BEX1Q9HBH7 125 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 ASCL3Q9NQ33 180 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 NKIRAS2Q9NYR9 191 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 CKLFQ9UBR5 152 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 HHLA2Q9UM44 414 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 POLR1DQ9Y2S0 133 aa12.43□□□□□ -0.42
ABCF3-201ENST00000292808 A0A1B0GUH1 482 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 TNFRSF10AO00220 468 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 HPXP02790 462 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 QDPRP09417 244 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 RFC3P40938 356 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 MECP2P51608 486 aaKnown RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 CSNK2A1P68400 391 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 SRSF6Q13247 344 aaKnown RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 METTL11BQ5VVY1 283 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 FAM166AQ6J272 317 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 CFAP77Q6ZQR2 320 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 TMEM123Q8N131 208 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 BEST4Q8NFU0 473 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 KCNE4Q8WWG9 221 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 SNAPC3Q92966 411 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 SLC17A5Q9NRA2 495 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 CDV3Q9UKY7 258 aaKnown RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 MGAT4AQ9UM21 535 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 MRPS18CQ9Y3D5 142 aaKnown RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 DMXL1Q9Y485 3027 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 SLC17A2O00624 439 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 GDF1P27539 372 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 GFRA1P56159 465 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 SPOCK1Q08629 439 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 OR1C1Q15619 314 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 HDDC2Q7Z4H3 204 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 OR51A2Q8NGJ7 313 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 DACT3Q96B18 629 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 FAM3DQ96BQ1 224 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 SFXN2Q96NB2 322 aa12.42□□□□□ -0.42
ABCF3-201ENST00000292808 ZNF703Q9H7S9 590 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 CGGBP1Q9UFW8 167 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-201ENST00000292808 ZNF726A6NNF4 738 aa12.41□□□□□ -0.42
ABCF3-201ENST00000292808 H7C417 338 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms