RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 FABP4P15090 132 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 LBX1P52954 281 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 SELENOWP63302 87 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 HBA1P69905 142 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 RAE1P78406 368 aaKnown RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 PMPCAQ10713 525 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 LGALSLQ3ZCW2 172 aaPredicted RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 SPIN4Q56A73 249 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 ARSIQ5FYB1 569 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 GCSAMLQ5JQS6 135 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 TMEM268Q5VZI3 342 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 ASCL5Q7RTU5 278 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 TMED4Q7Z7H5 227 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 HIST1H2BAQ96A08 127 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 MSI2Q96DH6 328 aaKnown RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 OR4K3Q96R72 315 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 TRIM36Q9NQ86 728 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 IFITM10A6NMD0 228 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 ANXA2P2A6NMY6 339 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 TNFSF14O43557 240 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 PTHP01270 115 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 ANXA2P07355 339 aaKnown RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 GATA3P23771 443 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 IMPA1P29218 277 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 CYB561P49447 251 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 CRYBA2P53672 197 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 HOXC5Q00444 222 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 ASTLQ6HA08 431 aaPredicted RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 PTCRAQ6ISU1 281 aaPredicted RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 NEIL2Q969S2 332 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 GABARAPL3Q9BY60 117 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 LPAR5Q9H1C0 372 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 GTSF1LQ9H1H1 148 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 SERTAD3Q9UJW9 196 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 OR10H1Q9Y4A9 318 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 RFXAPO00287 272 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 UPK3AO75631 287 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 IL6RP08887 468 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 SRSF1Q07955 248 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPARC-201ENST00000231061 SPOCK1Q08629 439 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ELAVL3Q14576 367 aaKnown RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 NHLRC3Q5JS37 347 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 PLAC9Q5JTB6 97 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 PRR31Q5SQ13 230 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 COL5A1-AS1Q5SY13 56 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 MBNL2Q5VZF2 373 aaKnown RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 HIST2H2AA3Q6FI13 130 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 OR4P4Q8NGL7 312 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ADAMTS17Q8TE56 1095 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 SMPDL3BQ92485 455 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 P2RX4Q99571 388 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 CDCA4Q9BXL8 241 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 HRASLSQ9HDD0 168 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 CUTCQ9NTM9 273 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 HAO2Q9NYQ3 351 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ABI3Q9P2A4 366 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 CCL26Q9Y258 94 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 HS3ST2Q9Y278 367 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 SLC35A3Q9Y2D2 325 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 MEIKINA0A087WXM9 373 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ANKRD20A5PA0PJZ0 165 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 C1orf226A1L170 272 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 NRG2O14511 850 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 CCL16O15467 120 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 MMP7P09237 267 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 MNDAP41218 407 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 HCCSP53701 268 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 CDC42P60953 191 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 TBPL1P62380 186 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 KIAA0141Q14154 515 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 TGIF1Q15583 401 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ZNF770Q6IQ21 691 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 COMMD6Q7Z4G1 85 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ADCK2Q7Z695 626 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 SLC39A11Q8N1S5 342 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 CSNK1A1LQ8N752 337 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 OR56A1Q8NGH5 318 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 MAFAQ8NHW3 353 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 RNF133Q8WVZ7 376 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 THAP4Q8WY91 577 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 NEIL1Q96FI4 390 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 ALG12Q9BV10 488 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 S1PR5Q9H228 398 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 PPIAL4EA0A075B759 164 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 COLCA2A8K830 154 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 GRXCR1A8MXD5 290 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 PPIAL4DF5H284 164 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 NPIPB9F8W1W9 429 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 ZIC2O95409 532 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 CDS2O95674 445 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 PPIAL4FP0DN26 164 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 CSNK2A2P19784 350 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 HOXA5P20719 270 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 GRPRP30550 384 aa7.51□□□□□ -1.21
SPARC-201ENST00000231061 OTX1P32242 354 aaPredicted RBP7.51□□□□□ -1.21
SPARC-201ENST00000231061 SLC6A11P48066 632 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms