RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 MRPS24Q96EL2 167 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 OXGR1Q96P68 337 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZPBPQ9BS86 351 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ARV1Q9H2C2 271 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 IFT22Q9H7X7 185 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 KCMF1Q9P0J7 381 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OR14J1Q9UGF5 321 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PURGQ9UJV8 347 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZNF223Q9UK11 482 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 ARID1AO14497 2285 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FXYD1O00168 92 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SH2D1BO14796 132 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CST4P01036 141 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PCMT1P22061 227 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 RPL12P30050 165 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 THBS4P35443 961 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CLDN15P56746 228 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 RACK1P63244 317 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 CLINT1Q14677 625 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ALKBH2Q6NS38 261 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FAM111BQ6SJ93 734 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TMPRSS11FQ6ZWK6 438 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 NLRC3Q7RTR2 1065 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PTOV1Q86YD1 416 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PFN4Q8NHR9 129 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 EDARADDQ8WWZ3 215 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FER1L6-AS2Q96M78 137 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ACKR4Q9NPB9 350 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MEIKINA0A087WXM9 373 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OR52A4PA6NMU1 304 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 KLRC4-KLRK1H3BQV0 150 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ABCD3P28288 659 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ARRB2P32121 409 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 UBE2G2P60604 165 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ARG2P78540 354 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SLC17A1Q14916 467 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ARSJQ5FYB0 599 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 C1QTNF12Q5T7M4 302 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TCTN3Q6NUS6 607 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 Q6ZRG5 221 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 LINC00596Q86U02 117 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 LSRQ86X29 649 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 BCORP1Q8N888 145 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 DTX3Q8N9I9 347 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZNF740Q8NDX6 193 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SPSB1Q96BD6 273 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TOE1Q96GM8 510 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZNF331Q9NQX6 463 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 PLRG1O43660 514 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 SELENOFO60613 162 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OR7C1O76099 320 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 TOX4O94842 621 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 HIST1H1CP16403 213 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 TBXA2RP21731 343 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OTX2P32243 289 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CRYBB2P43320 205 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CTAG1AP78358 180 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FUT7Q11130 342 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SLC10A1Q14973 349 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 RAB35Q15286 201 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ANGPTL5Q86XS5 388 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 IL22RA1Q8N6P7 574 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SIGLECL1Q8N7X8 197 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OR4D6Q8NGJ1 314 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FYTTD1Q96QD9 318 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 MAP3K3Q99759 626 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TEX101Q9BY14 249 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SLC2A9Q9NRM0 540 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 GAR1Q9NY12 217 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 TMEM238LA0A1B0GVL6 79 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 GDF1P27539 372 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CLDN17P56750 224 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CDK5Q00535 292 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 RBMXL3Q8N7X1 1067 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 OR5M8Q8NGP6 311 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PIGCQ92535 297 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FGF14Q92915 247 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MANBALQ9NQG1 85 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MEIS3P1A6NDR6 274 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 LILRA5A6NI73 299 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 M0QZK8 103 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TERTO14746 1132 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 DEGS1O15121 323 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 GGCTO75223 188 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 APOA2P02652 100 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 F13BP05160 661 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MAKP20794 623 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZP2Q05996 745 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OR8B8Q15620 311 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 LCN10Q6JVE6 187 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 AAED1Q7RTV5 226 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CMTM2Q8TAZ6 248 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 HMGCLL1Q8TB92 370 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SECTM1Q8WVN6 248 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 EGLN1Q9GZT9 426 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 STARD5Q9NSY2 213 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MARCH5Q9NX47 278 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms