RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KCNMB1Q16558 191 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 PCK2Q16822 640 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 CEACAM16Q2WEN9 425 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 PHYHD1Q5SRE7 291 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 OR2G6Q5TZ20 316 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 LINGO2Q7L985 606 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 BHLHA15Q7RTS1 189 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-219ENST00000592927 P2RY8Q86VZ1 359 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 ZNF433Q8N7K0 673 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-219ENST00000592927 STEAP2Q8NFT2 490 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 SLC26A10Q8NG04 563 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 OR10H5Q8NGA6 315 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 OR6N2Q8NGY6 317 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 OTOSQ8NHW6 89 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 SNX33Q8WV41 574 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 SPRYD4Q8WW59 207 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-219ENST00000592927 GATAD2BQ8WXI9 593 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 ISOC1Q96CN7 298 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 OPALINQ96PE5 141 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 TBX5Q99593 518 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 FUNDC2Q9BWH2 189 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 TRIM36Q9NQ86 728 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 MRPL22Q9NWU5 206 aaKnown RBP10.4□□□□□ -0.74
DDX39A-219ENST00000592927 BABAM2Q9NXR7 383 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 EDARQ9UNE0 448 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 ATRQ13535 2644 aa10.4□□□□□ -0.74
DDX39A-219ENST00000592927 ZNF593O00488 134 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 RAD51DO75771 328 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 SULT1C4O75897 302 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 GABARAPO95166 117 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 CD53P19397 219 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 ALOX5APP20292 161 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 TGFBR2P37173 567 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 LIPAP38571 399 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 SH3BGRP55822 239 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 LSM6P62312 80 aaKnown RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 DBPQ10586 325 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 TSC22D1Q15714 1073 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 ETFDHQ16134 617 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 TSTQ16762 297 aaKnown RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 OR7E24Q6IFN5 339 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 SLC18B1Q6NT16 456 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 KCTD18Q6PI47 426 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 LRFN4Q6PJG9 635 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 LYPD4Q6UWN0 246 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 GDPGP1Q6ZNW5 385 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 FOXL2NBQ6ZUU3 175 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 VASH1Q7L8A9 365 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 DPY19L4Q7Z388 723 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 ALDH16A1Q8IZ83 802 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 UFD1Q92890 307 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
DDX39A-219ENST00000592927 ACTR6Q9GZN1 396 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 OR10A4Q9H209 315 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 NDRG3Q9UGV2 375 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 ENPP5Q9UJA9 477 aa10.39□□□□□ -0.75
DDX39A-219ENST00000592927 CACNA1CQ13936 2221 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 IGKV1D-43A0A0B4J1Z2 117 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 TUBAL3A6NHL2 446 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 METTL15A6NJ78 407 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 INAFM1C9JVW0 142 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 J3QLW9 94 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 DHHO43323 396 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 KRT8P05787 483 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 CD1AP06126 327 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 PPP3CBP16298 524 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF19P17023 458 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 PSMA1P25786 263 aaKnown RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 HOXC12P31275 282 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 CCKARP32238 428 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 GBX2P52951 348 aaPredicted RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 HCCSP53701 268 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 ARF1P84077 181 aaKnown RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 SNTB1Q13884 538 aaKnown RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 GABRA6Q16445 453 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 CCDC58Q4VC31 144 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF684Q5T5D7 378 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 ANKRD16Q6P6B7 361 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 FAM220AQ7Z4H9 259 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 KLBQ86Z14 1044 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 C1orf162Q8NEQ5 155 aaPredicted RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 OR1K1Q8NGR3 316 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 NSMAFQ92636 917 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 S100PBPQ96BU1 408 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 ZNF837Q96EG3 531 aaPredicted RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 C4orf36Q96KX1 117 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 MED18Q9BUE0 208 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 CDADC1Q9BWV3 514 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 NELFAQ9H3P2 528 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 ISG20L2Q9H9L3 353 aaKnown RBP10.38□□□□□ -0.75
DDX39A-219ENST00000592927 NDUFB11Q9NX14 153 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 COPS3Q9UNS2 423 aa10.38□□□□□ -0.75
DDX39A-219ENST00000592927 TRIM64BA6NI03 449 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 H3BMQ9 156 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SLC22A1O15245 554 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 GPANK1O95872 356 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 SPARCP09486 303 aa10.37□□□□□ -0.75
DDX39A-219ENST00000592927 NPR2P20594 1047 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms