RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SLIRPQ9GZT3 109 aaKnown RBP22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 SHISA3A0PJX4 238 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 LOC110117498-PIK3R3F6TDL0 507 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 FARS2O95363 451 aaKnown RBP22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 HOXD4P09016 255 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 MMP7P09237 267 aaPredicted RBP22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 PSMA6P60900 246 aaKnown RBP22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 GRB2P62993 217 aaKnown RBP22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 ZMAT1Q5H9K5 638 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 FAM27D1Q5T7N8 215 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 UNQ9370/PRO34162Q6UXP9 181 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 OR14A2Q96R54 314 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 WACQ9BTA9 647 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 COMMD4Q9H0A8 199 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 ZNF835Q9Y2P0 537 aa22.79■■□□□ 1.24
SCAMP4-210ENST00000588555 PATE4P0C8F1 98 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 HSD11B1P28845 292 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 OTX1P32242 354 aaPredicted RBP22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 SDC2P34741 201 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 SCRN3Q0VDG4 424 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 TAF13Q15543 124 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 RSPO1Q2MKA7 263 aaPredicted RBP22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 ZNF544Q6NX49 715 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 GFRALQ6UXV0 394 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 RDH10Q8IZV5 341 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 ZNF676Q8N7Q3 588 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 MED18Q9BUE0 208 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 PLEK2Q9NYT0 353 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 OR52A1Q9UKL2 312 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 GTF2A1LQ9UNN4 478 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 SGCEO43556 437 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 CDRT1O95170 752 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 IL1AP01583 271 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 SH3BGRP55822 239 aaPredicted RBP22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 PCBD1P61457 104 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 RAB35Q15286 201 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 DGUOKQ16854 277 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 OR10AC1Q8NH08 325 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 KCNJ15Q99712 375 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 CCDC59Q9P031 241 aaKnown RBP22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 TIMM10BQ9Y5J6 103 aa22.78■■□□□ 1.24
SCAMP4-210ENST00000588555 A0A096LPE4 126 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 TRBV5-5A0A0J9YX44 114 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 A0A1W2PPZ6 126 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 SYNGR3O43761 229 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 GATBO75879 557 aaKnown RBP22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 CNOT4O95628 575 aaKnown RBP22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 CRHP06850 196 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 TIMP3P35625 211 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 PRKXP51817 358 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 PER3P56645 1201 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 PSG4Q00888 419 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 ODF4Q2M2E3 257 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 DOLPP1Q86YN1 238 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 NAXEQ8NCW5 288 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 OR2H1Q9GZK4 316 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 HDHD2Q9H0R4 259 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 PLSCR4Q9NRQ2 329 aa22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 INTS1Q8N201 2190 aaKnown RBP22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 TPRP12270 2363 aaKnown RBP22.77■■□□□ 1.24
SCAMP4-210ENST00000588555 UCHL1P09936 223 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 CLEC2LP0C7M8 214 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 CALRP27797 417 aaKnown RBP22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 MAGEB1P43366 347 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF774Q6NX45 483 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 C3P1Q6ZMU1 363 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 Q6ZT83 130 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 BTLAQ7Z6A9 289 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 OR51A4Q8NGJ6 313 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 OR1K1Q8NGR3 316 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 STARD4Q96DR4 205 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 WNT5BQ9H1J7 359 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 TP63Q9H3D4 680 aaPredicted RBP22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 OR6C6A6NF89 314 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF879B4DU55 563 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 PRRG2O14669 202 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 SLC19A2O60779 497 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 CGAP01215 116 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 CRYGSP22914 178 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 MXD1Q05195 221 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 EIF2S3LQ2VIR3 472 aaKnown RBP22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 Q499Y3 187 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 PAMR1Q6UXH9 720 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 PRSS45Q7RTY3 260 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 ZGRF1Q86YA3 2104 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 ZFP3Q96NJ6 502 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 MOB1AQ9H8S9 216 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 BRD7Q9NPI1 651 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 SNTG1Q9NSN8 517 aa22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 NUFIP1Q9UHK0 495 aaKnown RBP22.76■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF503-AS2A6NEH8 195 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 DOK2O60496 412 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 ISG15P05161 165 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 TMIGD3P0DMS9 266 aaPredicted RBP22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 ANOS1P23352 680 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 CX3CR1P49238 355 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF121P58317 390 aaPredicted RBP22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 BCL2L15Q5TBC7 163 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 ANKRD16Q6P6B7 361 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 ELMOD2Q8IZ81 293 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms