RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 FREM1Q5H8C1 2179 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 FAM90A27PA6NNH2 459 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 RER1O15258 196 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 GPRIN2O60269 458 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 CLDN14O95500 239 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 SERPINA3P01011 423 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 SMIM18P0DKX4 95 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 ZNF12P17014 697 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 PSMB9P28065 219 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 UGT2B10P36537 528 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 HTR5AP47898 357 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 GDI2P50395 445 aaKnown RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 HCCSP53701 268 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 FOXG1P55316 489 aaPredicted RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 PIGFQ07326 219 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM1-209ENST00000558072 NEDD8Q15843 81 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 TBC1D28Q2M2D7 210 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 CCDC92Q53HC0 331 aaPredicted RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 PABPC1L2AQ5JQF8 200 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 LIPNQ5VXI9 398 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 OTPQ5XKR4 325 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 MYO7BQ6PIF6 2116 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 CORO6Q6QEF8 472 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 ZNF704Q6ZNC4 412 aaPredicted RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 GPR141Q7Z602 305 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 MS4A15Q8N5U1 240 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 OR5L1Q8NGL2 311 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 GATAD2BQ8WXI9 593 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 HTRA1Q92743 480 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 MUL1Q969V5 352 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 MAP6Q96JE9 813 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 ZNF649Q9BS31 505 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 ACTR6Q9GZN1 396 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 COMMD4Q9H0A8 199 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 B3GNT2Q9NY97 397 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 SLCO1C1Q9NYB5 712 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 EIF3KQ9UBQ5 218 aaKnown RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 CLEC2DQ9UHP7 191 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 MRM2Q9UI43 246 aaKnown RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 LSM2Q9Y333 95 aaKnown RBP10.83□□□□□ -0.68
TPM1-209ENST00000558072 SPEF1Q9Y4P9 236 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 LRP12Q9Y561 859 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 R4GMQ9 66 aa10.83□□□□□ -0.68
TPM1-209ENST00000558072 TMEM269A0A1B0GVZ9 245 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 TMEM212A6NML5 194 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 LOC110117498-PIK3R3F6TDL0 507 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 CCRL2O00421 344 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 SYNGR3O43761 229 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 ZG16O60844 167 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 SEC14L2O76054 403 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 HLA-HP01893 362 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 HSMCR30P0CW71 290 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 GALP22466 123 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 CFL1P23528 166 aaKnown RBP10.82□□□□□ -0.68
TPM1-209ENST00000558072 STOMP27105 288 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 OR12D2P58182 307 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 PSMA6P60900 246 aaKnown RBP10.82□□□□□ -0.68
TPM1-209ENST00000558072 TPBGQ13641 420 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 BLMHQ13867 455 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 PPA1Q15181 289 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 TP53I3Q53FA7 332 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 ARMCX4Q5H9R4 360 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 LRRN1Q6UXK5 716 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 CFAP77Q6ZQR2 320 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 ZNF283Q8N7M2 679 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 SGCDQ92629 289 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 PELI1Q96FA3 418 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 WNT5BQ9H1J7 359 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 RGCCQ9H4X1 137 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 OPA3Q9H6K4 179 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 CRNNQ9UBG3 495 aaPredicted RBP10.82□□□□□ -0.68
TPM1-209ENST00000558072 CHD6Q8TD26 2715 aa10.82□□□□□ -0.68
TPM1-209ENST00000558072 TRBV2A0A0J9YWF9 115 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 NKX2-6A6NCS4 301 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 M0R135 149 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 OGG1O15527 345 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 PLPP2O43688 288 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 NOL3O60936 208 aaKnown RBP10.81□□□□□ -0.68
TPM1-209ENST00000558072 ABHD16AO95870 558 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 IGKV3-15P01624 115 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 UBCP0CG48 685 aaKnown RBP10.81□□□□□ -0.68
TPM1-209ENST00000558072 CPEP16870 476 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 OTX1P32242 354 aaPredicted RBP10.81□□□□□ -0.68
TPM1-209ENST00000558072 RPS27P42677 84 aaKnown RBP10.81□□□□□ -0.68
TPM1-209ENST00000558072 MAP2K4P45985 399 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 ALDH3B2P48448 385 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 FAM27E3Q08E93 113 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 ALKBH1Q13686 389 aaKnown RBP10.81□□□□□ -0.68
TPM1-209ENST00000558072 SNTB1Q13884 538 aaKnown RBP10.81□□□□□ -0.68
TPM1-209ENST00000558072 TSC22D1Q15714 1073 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 TMEM244Q5VVB8 128 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 XAF1Q6GPH4 301 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
TPM1-209ENST00000558072 PAMR1Q6UXH9 720 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms