RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 WDFY2Q96P53 400 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 INTS14Q96SY0 518 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 KLHDC3Q9BQ90 382 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TTYH2Q9BSA4 534 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NAA11Q9BSU3 229 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 CCDC32Q9BV29 185 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 EDEM2Q9BV94 578 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 BARHL1Q9BZE3 327 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 OR11A1Q9GZK7 315 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SYT4Q9H2B2 425 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MARCH7Q9H992 704 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SH2D2AQ9NP31 389 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 HPF1Q9NWY4 346 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 P4HTMQ9NXG6 502 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 QPCTLQ9NXS2 382 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 DLL3Q9NYJ7 618 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ABI3Q9P2A4 366 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 KLHL9Q9P2J3 617 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PLEKHB1Q9UF11 243 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 LAMP5Q9UJQ1 280 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 GNG8Q9UK08 70 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NPIPA1Q9UND3 350 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 RASD1Q9Y272 281 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 VDAC3Q9Y277 283 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MRPS18CQ9Y3D5 142 aaKnown RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 CMAHPQ9Y471 501 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SIRT4Q9Y6E7 314 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 KNL1Q8NG31 2342 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 OTOGLQ3ZCN5 2332 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 NAV2Q8IVL1 2488 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ANKRD12Q6UB98 2062 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 A0A1W2PNV4 684 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 CD8B2A6NJW9 211 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ZNF726A6NNF4 738 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 C17orf51A8MQB3 221 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 FAM171A2A8MVW0 826 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 C11orf98E9PRG8 122 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 STMND1H3BQB6 276 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SULT2B1O00204 365 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 DNPH1O43598 174 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ZIC3O60481 467 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SELENOFO60613 162 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ZNF254O75437 659 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 UPK1BO75841 260 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 TFP02787 698 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 RAF1P04049 648 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 HRGP04196 525 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OCM2P0CE71 109 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OCMP0CE72 109 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 NR2C1P13056 603 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 LIFP15018 202 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ZNF17P17021 662 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 CNR1P21554 472 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 EDNRAP25101 427 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 MAPK3P27361 379 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 CD82P27701 267 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 RBMS1P29558 406 aaKnown RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 DLSTP36957 453 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 GUCA1AP43080 201 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 CYB561P49447 251 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 EVX1P49640 407 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 GDI2P50395 445 aaKnown RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 CCR9P51686 369 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 AGFG1P52594 562 aaKnown RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 CSNK2A1P68400 391 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 MXD1Q05195 221 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SCN1BQ07699 218 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 RASGEF1BQ0VAM2 473 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 FOXF1Q12946 379 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SELENBP1Q13228 472 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 DNASE1L3Q13609 305 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OXA1LQ15070 435 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 ZNF239Q16600 458 aaKnown RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 TP53I3Q53FA7 332 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 LIPNQ5VXI9 398 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 MORN5Q5VZ52 161 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 AWAT2Q6E213 333 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SUMO4Q6EEV6 95 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 C3orf33Q6P1S2 294 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 DEGS2Q6QHC5 323 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 NHLRC1Q6VVB1 395 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 DCDC5Q6ZRR9 648 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 TMPPEQ6ZT21 453 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 TMPRSS12Q86WS5 348 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 UEVLDQ8IX04 471 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 CENPSQ8N2Z9 138 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 GDPD1Q8N9F7 314 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OR6X1Q8NH79 312 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OR5AK2Q8NH90 309 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 OTOSQ8NHW6 89 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 POC1BQ8TC44 478 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 SMAP2Q8WU79 429 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 ZNRF4Q8WWF5 429 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 KCNE4Q8WWG9 221 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 KIAA1143Q96AT1 154 aaPredicted RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 MIB2Q96AX9 1013 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 INTS12Q96CB8 462 aaKnown RBP3.95□□□□□ -1.78
SRP54-212ENST00000556992 SMIM19Q96E16 107 aa3.95□□□□□ -1.78
SRP54-212ENST00000556992 TRMT61AQ96FX7 289 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms