RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TMED1Q13445 227 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 MST1LQ2TV78 715 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 KLHL22Q53GT1 634 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 FAM205BPQ63HN1 556 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 STX19Q8N4C7 294 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF433Q8N7K0 673 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNRF4Q8WWF5 429 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 LGALS12Q96DT0 336 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 SNX18Q96RF0 628 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 CCDC90BQ9GZT6 254 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 CCNB1IP1Q9NPC3 277 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 RPRD1BQ9NQG5 326 aaKnown RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 VSX1Q9NZR4 365 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 WARS2Q9UGM6 360 aaKnown RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 PLCE1Q9P212 2302 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 CIB4A0PJX0 185 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC22A31A6NKX4 558 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF716A6NP11 495 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 LILRA1O75019 489 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 APOL3O95236 402 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 CDK1P06493 297 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SPI1P17947 270 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 ATP6V1E1P36543 226 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC16A1P53985 500 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 TUBA4AP68366 448 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 MVKQ03426 396 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 RASGEF1BQ0VAM2 473 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 BLMHQ13867 455 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 ABLIM2Q6H8Q1 611 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR7E24Q6IFN5 339 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF100Q8IYN0 542 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SPARTQ8N0X7 666 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR6V1Q8N148 313 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SYT14Q8NB59 555 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR51L1Q8NGJ5 315 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR52I1Q8NGK6 324 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR2T4Q8NH00 348 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR6X1Q8NH79 312 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC25A44Q96H78 314 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 TMEM80Q96HE8 168 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 TSSK2Q96PF2 358 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF385AQ96PM9 386 aaKnown RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 ALG12Q9BV10 488 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 MRPS26Q9BYN8 205 aaKnown RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 NUAK2Q9H093 628 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 RAB1BQ9H0U4 201 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SYT4Q9H2B2 425 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 RERGLQ9H628 205 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 FGF20Q9NP95 211 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 FBXO9Q9UK97 447 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 B9D1Q9UPM9 204 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 EXOGQ9Y2C4 368 aaKnown RBP9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 GRIP1Q9Y3R0 1128 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 SNX5Q9Y5X3 404 aa9.76□□□□□ -0.85
TRAPPC4-213ENST00000533149 IRGMA1A4Y4 181 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF724A8MTY0 619 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 DCTN6O00399 190 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 AHCYL1O43865 530 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC16A7O60669 478 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 GLCEO94923 617 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 CLPTM1O96005 669 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 ERCC1P07992 297 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 ADRA2AP08913 450 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 C21orf33P30042 268 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 GSTT1P30711 240 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 MAP2K4P45985 399 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 RAB40BQ12829 278 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 CAMK2DQ13557 499 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC35D3Q5M8T2 416 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 CARD17Q5XLA6 110 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 KCTD8Q6ZWB6 473 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 PRSS48Q7RTY5 328 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 HDDC2Q7Z4H3 204 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR4F15Q8NGB8 312 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 RBP7Q96R05 134 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 SIGLEC11Q96RL6 698 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 SUCNR1Q9BXA5 334 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 MRPL13Q9BYD1 178 aaKnown RBP9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 ING1Q9UK53 422 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 MOKQ9UQ07 419 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 SPEF1Q9Y4P9 236 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 FLVCR1Q9Y5Y0 555 aa9.75□□□□□ -0.85
TRAPPC4-213ENST00000533149 IGKV3D-15A0A087WSY6 115 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 B9A039 149 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 KHDRBS3O75525 346 aaKnown RBP9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 FADS2O95864 444 aaKnown RBP9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 IGHG1P01857 330 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 TFAP2AP05549 437 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 PGA4P0DJD7 388 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 DAOP14920 347 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 EPHA1P21709 976 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 CRABP1P29762 137 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 NTF4P34130 210 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms