RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 MCFD2Q8NI22 146 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 TBC1D15Q8TC07 691 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 TMEM171Q8WVE6 324 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 AP3S1Q92572 193 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 SMIM19Q96E16 107 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 MRPL13Q9BYD1 178 aaKnown RBP11.63□□□□□ -0.55
PHGDH-207ENST00000496756 ISG20L2Q9H9L3 353 aaKnown RBP11.63□□□□□ -0.55
PHGDH-207ENST00000496756 PLGRKTQ9HBL7 147 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 PALMDQ9NP74 551 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 RCE1Q9Y256 329 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 PEX16Q9Y5Y5 336 aa11.63□□□□□ -0.55
PHGDH-207ENST00000496756 MED12LQ86YW9 2145 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 H7C1C5 153 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 TMEM127O75204 238 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ARL6IP5O75915 188 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 CRHP06850 196 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 HLA-DOBP13765 273 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ALOX5APP20292 161 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 TCEA1P23193 301 aaKnown RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 CD79BP40259 229 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 GFRA1P56159 465 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 OR12D2P58182 307 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 LCN6P62502 163 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ROM1Q03395 351 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 KRTAP1-1Q07627 177 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 DCTN2Q13561 401 aaKnown RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 CDK5R1Q15078 307 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF829Q3KNS6 432 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 NHLRC1Q6VVB1 395 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 YRDCQ86U90 279 aaKnown RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 TPRA1Q86W33 373 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 GCNT2Q8N0V5 402 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF511Q8NB15 262 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 OR10H5Q8NGA6 315 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 PELI1Q96FA3 418 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 TSSK2Q96PF2 358 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 MROQ9BYG7 248 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 SLIRPQ9GZT3 109 aaKnown RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 NXF2Q9GZY0 626 aaKnown RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 RERGLQ9H628 205 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF701Q9NV72 531 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 GNG8Q9UK08 70 aa11.62□□□□□ -0.55
PHGDH-207ENST00000496756 RAI1Q7Z5J4 1906 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-207ENST00000496756 ROS1P08922 2347 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ABCA1O95477 2261 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 HEATR5AQ86XA9 2040 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 A0A0J9YW62 118 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 PNMA8CA0A1B0GUJ8 204 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 SLC35F4A4IF30 521 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 DCTN6O00399 190 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF593O00488 134 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-207ENST00000496756 GABRPO00591 440 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 EIF1AYO14602 144 aaKnown RBP11.61□□□□□ -0.55
PHGDH-207ENST00000496756 TNFSF13O75888 250 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 LALBAP00709 142 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 PGA4P0DJD7 388 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 PGA3P0DJD8 388 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 CTLA4P16410 223 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 EDNRAP25101 427 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 MAPK3P27361 379 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-207ENST00000496756 SHC1P29353 583 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 MTNR1BP49286 362 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ATP5J2P56134 94 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 RPS25P62851 125 aaKnown RBP11.61□□□□□ -0.55
PHGDH-207ENST00000496756 RASGEF1BQ0VAM2 473 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 TNK1Q13470 666 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF846Q147U1 533 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 PCK2Q16822 640 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 YIF1BQ5BJH7 314 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF684Q5T5D7 378 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 CREB3L2Q70SY1 520 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 RHOUQ7L0Q8 258 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 KDM8Q8N371 416 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 SLC26A10Q8NG04 563 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ZNRF4Q8WWF5 429 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 BORCS5Q969J3 196 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 TMED9Q9BVK6 235 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 MED29Q9NX70 200 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 ELOVL5Q9NYP7 299 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 CLCF1Q9UBD9 225 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 COA3Q9Y2R0 106 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-207ENST00000496756 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
PHGDH-207ENST00000496756 MED12Q93074 2177 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 TRBV2A0A0J9YWF9 115 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 TVP23AA6NH52 213 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 CLDN25C9JDP6 229 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 GPR171O14626 319 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 TNFSF11O14788 317 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 MYL9P24844 172 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 LAP3P28838 519 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 CSNK1A1P48729 337 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 GDI2P50395 445 aaKnown RBP11.6□□□□□ -0.55
PHGDH-207ENST00000496756 CCR9P51686 369 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 ZNF133P52736 654 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-207ENST00000496756 FABP5Q01469 135 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 SRYQ05066 204 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
PHGDH-207ENST00000496756 ETFDHQ16134 617 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms