RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-213ENST00000492506 SSX5O60225 188 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 NUDT14O95848 222 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 IGHV3-9P01782 118 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 SEMG1P04279 462 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 HNF1AP20823 631 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 PRKACGP22612 351 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 AZGP1P25311 298 aaKnown RBP11.45□□□□□ -0.58
HDAC3-213ENST00000492506 CALCRP30988 508 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 FOXG1P55316 489 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-213ENST00000492506 CDC42P60953 191 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 DHODHQ02127 395 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 ST3GAL4Q11206 333 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 GABRA6Q16445 453 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 SWI5Q1ZZU3 235 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 CR1LQ2VPA4 569 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 NDUFAF6Q330K2 333 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 Q3ZCU0 254 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 LRIF1Q5T3J3 769 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 FBXW9Q5XUX1 488 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 ZCCHC12Q6PEW1 402 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 STX12Q86Y82 276 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 LAX1Q8IWV1 398 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF100Q8IYN0 542 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 RFLNBQ8N5W9 214 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 COX18Q8N8Q8 333 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 WDR31Q8NA23 367 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 OR10A6Q8NH74 314 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 ACOT12Q8WYK0 555 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 PHF21AQ96BD5 680 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 KCNJ15Q99712 375 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 SOSTQ9BQB4 213 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 ADAM19Q9H013 955 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 NDUFB11Q9NX14 153 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 GSTK1Q9Y2Q3 226 aa11.45□□□□□ -0.58
HDAC3-213ENST00000492506 NPIPA5A0A0B4J1W7 369 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 A0A0B4J203 849 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 NPIPA7E9PJI5 369 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 NPIPB9F8W1W9 429 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 M0R1B8 84 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 KCNAB3O43448 404 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 TCF21O43680 179 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 TBX19O60806 448 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 GPX5O75715 221 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 TGFAP01135 160 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 PTHP01270 115 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 NPIPA8P0DM63 369 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 APEHP13798 732 aaKnown RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 APOBEC3AP31941 199 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 RPS19P39019 145 aaKnown RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 PDLIM4P50479 330 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 IL1RL1Q01638 556 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 FGL1Q08830 312 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 SMN1Q16637 294 aaKnown RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 PABPC1L2AQ5JQF8 200 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 FAM209BQ5JX69 171 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 ABLIM2Q6H8Q1 611 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 SLC27A4Q6P1M0 643 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 FIP1L1Q6UN15 594 aaKnown RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 SERPINA11Q86U17 422 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 Q8N402 240 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 FAM86B1Q8N7N1 296 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 OR2T4Q8NH00 348 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 TMEM163Q8TC26 289 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 CDS1Q92903 461 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 FOXN4Q96NZ1 517 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 CPPED1Q9BRF8 314 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 C1QTNF6Q9BXI9 259 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 DNTTIP1Q9H147 329 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 ABCB9Q9NP78 766 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 EXOSC4Q9NPD3 245 aaKnown RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 SIRT3Q9NTG7 399 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-213ENST00000492506 COA4Q9NYJ1 87 aa11.44□□□□□ -0.58
HDAC3-213ENST00000492506 TRRAPQ9Y4A5 3859 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 TRBV5-3A0A0A0MS03 114 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 CIB4A0PJX0 185 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ARRDC5A6NEK1 342 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF716A6NP11 495 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 SLC28A1O00337 649 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ITGA5P08648 1049 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 FGF2P09038 288 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 PRPH2P23942 346 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 TGM4P49221 684 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 DIO1P49895 249 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 PUDPQ08623 228 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 PDE7AQ13946 482 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 LRFN4Q6PJG9 635 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 SZRD1Q7Z422 152 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 OR1M1Q8NGA1 313 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 C3orf49Q96BT1 292 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ITCHQ96J02 903 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 FCRL1Q96LA6 429 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 KCTD7Q96MP8 289 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 SLC38A2Q96QD8 506 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 RBP7Q96R05 134 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 OR5B2Q96R09 309 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 STACQ99469 402 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms