RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 INSP01308 110 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 ALDOBP05062 364 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 RETP07949 1114 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 POLR2MP0CAP2 368 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 TROVE2P10155 538 aaKnown RBP eCLIP3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 TDGF1P13385 188 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 CCNE1P24864 410 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 NUDT1P36639 197 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 REG3AQ06141 175 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 TGM3Q08188 693 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 GTF3C1Q12789 2109 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 LRRC66Q68CR7 880 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 C6orf89Q6UWU4 347 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 NIPA1Q7RTP0 329 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 LHFPL3Q86UP9 236 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF557Q8N988 423 aaPredicted RBP3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 SPATA4Q8NEY3 305 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 ELSPBP1Q96BH3 223 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 MED8Q96G25 268 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 NRTNQ99748 197 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 SH3GL1Q99961 368 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 DEFB127Q9H1M4 99 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 CLMPQ9H6B4 373 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 EML4Q9HC35 981 aaKnown RBP3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 ABCB10Q9NRK6 738 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 EXD2Q9NVH0 621 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 XCL2Q9UBD3 114 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 NUP50Q9UKX7 468 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 NUP210Q8TEM1 1887 aaPredicted RBP3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 PTPRBP23467 1997 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 THADAQ6YHU6 1953 aa3.36□□□□□ -1.87
PRPF38A-203ENST00000487160 H0YIV9 168 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 CASQ2O14958 399 aaPredicted RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 PPP1R2P9O14990 202 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ZBTB5O15062 677 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 WBP4O75554 376 aaKnown RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 IGHV4-34P06331 123 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ANXA8P13928 327 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 HPGDP15428 266 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF17P17021 662 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 RORAP35398 523 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 GPR6P46095 362 aaPredicted RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 RPS9P46781 194 aaKnown RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 SH3BGRP55822 239 aaPredicted RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 KRTAP10-3P60369 221 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 FZD2Q14332 565 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 SF3A2Q15428 464 aaKnown RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 VPS26BQ4G0F5 336 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 LRRC10Q5BKY1 277 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 XKR7Q5GH72 579 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ANXA8L1Q5VT79 327 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF836Q6ZNA1 936 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ZADH2Q8N4Q0 377 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 CEP112Q8N8E3 955 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 B3GNT7Q8NFL0 401 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 SLC22A8Q8TCC7 542 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 RNF138Q8WVD3 245 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 CLDN23Q96B33 292 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF707Q96C28 371 aaPredicted RBP3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 TSC2P49815 1807 aa3.35□□□□□ -1.87
PRPF38A-203ENST00000487160 PTPRDP23468 1912 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 PLXNB3Q9ULL4 1909 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF638Q14966 1978 aaKnown RBP3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 TRIP11Q15643 1979 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 KALRNO60229 2985 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 IGKV1D-13A0A0B4J2D9 117 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 SOX15O60248 233 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 FGGP02679 453 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 IGKV1-13P0DP09 117 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF43P17038 809 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 SLC11A1P49279 550 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 SUB1P53999 127 aaKnown RBP eCLIP3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 CDH6P55285 790 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 GPX6P59796 221 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 MRPS22P82650 360 aaKnown RBP3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 CKAP4Q07065 602 aaKnown RBP3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ARHGAP19Q14CB8 494 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 RCN1Q15293 331 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ALX1Q15699 326 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 SASS6Q6UVJ0 657 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 FAM71E2Q8N5Q1 922 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 MS4A15Q8N5U1 240 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 LINC01555Q8NAE3 123 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 OR4F15Q8NGB8 312 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ESR2Q92731 530 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 KCTD14Q9BQ13 255 aaPredicted RBP3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 FAM192AQ9GZU8 254 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ASB8Q9H765 288 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ANKRA2Q9H9E1 313 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 HEBP1Q9NRV9 189 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 ZNF225Q9UK10 706 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 NDRG2Q9UN36 371 aaKnown RBP3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 NEU3Q9UQ49 428 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 CELSR3Q9NYQ7 3312 aa3.34□□□□□ -1.87
PRPF38A-203ENST00000487160 NAV2Q8IVL1 2488 aa3.33□□□□□ -1.88
PRPF38A-203ENST00000487160 MUC22E2RYF6 1773 aaPredicted RBP3.33□□□□□ -1.88
PRPF38A-203ENST00000487160 OBSL1O75147 1896 aa3.33□□□□□ -1.88
PRPF38A-203ENST00000487160 DENND4CQ5VZ89 1909 aa3.33□□□□□ -1.88
PRPF38A-203ENST00000487160 A0A0D9SFI3 127 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms