RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ATPIF1Q9UII2 106 aa12.25□□□□□ -0.45
SHMT2-203ENST00000449049 IKZF2Q9UKS7 526 aa12.25□□□□□ -0.45
SHMT2-203ENST00000449049 LRP12Q9Y561 859 aa12.25□□□□□ -0.45
SHMT2-203ENST00000449049 SLC25A15Q9Y619 301 aa12.25□□□□□ -0.45
SHMT2-203ENST00000449049 SMG1Q96Q15 3661 aaKnown RBP12.24□□□□□ -0.45
SHMT2-203ENST00000449049 A0A1W2PR80 420 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 J3QLW9 94 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 CLDN14O95500 239 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 MT-ND5P03915 603 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 COX5BP10606 129 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 ZNF19P17023 458 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 TFF3Q07654 80 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 ECH1Q13011 328 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 DOC2BQ14184 412 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 OR1F12Q8NHA8 337 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 FCGR1BQ92637 280 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 LRRC46Q96FV0 321 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 OR5M11Q96RB7 305 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 RBM38Q9H0Z9 239 aaKnown RBP12.24□□□□□ -0.45
SHMT2-203ENST00000449049 GNG8Q9UK08 70 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 ESPL1Q14674 2120 aa12.24□□□□□ -0.45
SHMT2-203ENST00000449049 LCKP06239 509 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 H2BFMP0C1H6 154 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 CBR1P16152 277 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 DCTDP32321 178 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 GRB2P62993 217 aaKnown RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 SPHARQ15513 63 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 ZNF367Q7RTV3 350 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 FAM220AQ7Z4H9 259 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 ZNF584Q8IVC4 421 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 FAM169BQ8N8A8 192 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 GATAD2BQ8WXI9 593 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 PELI1Q96FA3 418 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 MOV10Q9HCE1 1003 aaKnown RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 ACOXLQ9NUZ1 547 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 CRNNQ9UBG3 495 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 FBXL3Q9UKT7 428 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 IGKV3-15P01624 115 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 TACSTD2P09758 323 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 PPP3CBP16298 524 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 JUNBP17275 347 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 CRYGSP22914 178 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 OTX1P32242 354 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 RIDAP52758 137 aaKnown RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 ACSM1Q08AH1 577 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 MRPL28Q13084 256 aaKnown RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 MED22Q15528 200 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 TAB1Q15750 504 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 LIPNQ5VXI9 398 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 YIPF7Q8N8F6 280 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-203ENST00000449049 KCNJ15Q99712 375 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 BABAM2Q9NXR7 383 aa12.23□□□□□ -0.45
SHMT2-203ENST00000449049 CFAP46Q8IYW2 2715 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 SRSF10O75494 262 aaKnown RBP12.22□□□□□ -0.45
SHMT2-203ENST00000449049 ZNF14P17017 642 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-203ENST00000449049 HTR5AP47898 357 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 SORDQ00796 357 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 PLP2Q04941 152 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 RAB39AQ14964 217 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 PPA1Q15181 289 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 TAF13Q15543 124 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 NEDD8Q15843 81 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 RSPO1Q2MKA7 263 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-203ENST00000449049 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 SSX8Q7RTT4 187 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-203ENST00000449049 HAVCR2Q8TDQ0 301 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 MYO7BQ6PIF6 2116 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 IQCMA0A1B0GVH7 501 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 PYCARD-AS1I3L0S3 204 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 AGFG2O95081 481 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 LALBAP00709 142 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 IGLV1-44P01699 117 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 SERPINA5P05154 406 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 HSD11B1P28845 292 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 BDH1Q02338 343 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 C3orf36Q3SXR2 165 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 C22orf34Q6ZV56 151 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 MUL1Q969V5 352 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 TRIM36Q9NQ86 728 aa12.22□□□□□ -0.45
SHMT2-203ENST00000449049 WIPF3A6NGB9 483 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 E9PI62 339 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 INMTO95050 263 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 STOMP27105 288 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
SHMT2-203ENST00000449049 GRNP28799 593 aaKnown RBP12.21□□□□□ -0.45
SHMT2-203ENST00000449049 TGM4P49221 684 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 GBX2P52951 348 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-203ENST00000449049 PSMA6P60900 246 aaKnown RBP12.21□□□□□ -0.45
SHMT2-203ENST00000449049 SYT6Q5T7P8 510 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-203ENST00000449049 RORBQ92753 470 aa12.21□□□□□ -0.45
SHMT2-203ENST00000449049 SPTSSAQ969W0 71 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms