RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR5AK2Q8NH90 309 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SMARCD2Q92925 531 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 DDA1Q9BW61 102 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 TTTY10Q9BZA0 68 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 ACTR3CQ9C0K3 210 aaPredicted RBP17.29■□□□□ 0.36
HMGA1-205ENST00000447654 TRIOO75962 3097 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 TMEM269A0A1B0GVZ9 245 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 MEIS3P1A6NDR6 274 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 H0YIZ8 118 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 M0QYG6 137 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 TBX6O95947 436 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-205ENST00000447654 GYPBP06028 91 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 SOD3P08294 240 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 FCARP24071 287 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 PRKAG1P54619 331 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 NANOS3P60323 173 aaKnown RBP17.28■□□□□ 0.36
HMGA1-205ENST00000447654 AGERQ15109 404 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 ARHGAP40Q5TG30 622 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 FAM46CQ5VWP2 391 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF740Q8NDX6 193 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 OR13C2Q8NGS9 318 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 GPR148Q8TDV2 347 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 NTNG2Q96CW9 530 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 NUS1Q96E22 293 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 PBDC1Q9BVG4 233 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 MTHFD2LQ9H903 347 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-205ENST00000447654 KCNJ16Q9NPI9 418 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 C9J4A7 227 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 PBX2P40425 430 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF136P52737 540 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 EFNB2P52799 333 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 ADAM8P78325 824 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 SLC10A1Q14973 349 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 AKR1C8PQ5T2L2 129 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 ZG16BQ96DA0 208 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 PACRGQ96M98 296 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-205ENST00000447654 F2RL3Q96RI0 385 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 SLC6A7Q99884 636 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 OPN3Q9H1Y3 402 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-205ENST00000447654 RAB18Q9NP72 206 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 C20orf141Q9NUB4 165 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 MSRAQ9UJ68 235 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 MED31Q9Y3C7 131 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 MMACHCQ9Y4U1 282 aa17.28■□□□□ 0.36
HMGA1-205ENST00000447654 KIAA1549LQ6ZVL6 1849 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 USP34Q70CQ2 3546 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 DLEU1O43261 78 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 JTBO76095 146 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 AGR2O95994 175 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 POU2F2P09086 479 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 MSX1P28360 303 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 ELAVL3Q14576 367 aaKnown RBP17.27■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF674Q2M3X9 581 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 TAF8Q7Z7C8 310 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 PPP1R3BQ86XI6 285 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF595Q8IYB9 648 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 LRRC18Q8N456 261 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 OR51D1Q8NGF3 324 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 PFN4Q8NHR9 129 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 MVB12AQ96EY5 273 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 PELI2Q9HAT8 420 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 OR2S2Q9NQN1 319 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 KCNE3Q9Y6H6 103 aa17.27■□□□□ 0.36
HMGA1-205ENST00000447654 DOCK8Q8NF50 2099 aa17.27■□□□□ 0.35
HMGA1-205ENST00000447654 MDC1Q14676 2089 aaKnown RBP17.26■□□□□ 0.35
HMGA1-205ENST00000447654 EDDM13A0A1B0GTR0 161 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 RTCAO00442 366 aaKnown RBP17.26■□□□□ 0.35
HMGA1-205ENST00000447654 SLC17A2O00624 439 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 TMPRSS11DO60235 418 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 LYPD3O95274 346 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 CHATP28329 748 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 GPR1P46091 355 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 SLC9A5Q14940 896 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 RAB11BQ15907 218 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 SCGB2B2Q4G0G5 96 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 ARL14Q8N4G2 192 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 OR9A2Q8NGT5 310 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 RNF166Q96A37 237 aaPredicted RBP17.26■□□□□ 0.35
HMGA1-205ENST00000447654 SLC22A18Q96BI1 424 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 FAM3DQ96BQ1 224 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 FAM212BQ9NTI7 297 aaPredicted RBP17.26■□□□□ 0.35
HMGA1-205ENST00000447654 DUXAA6NLW8 204 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 EFSO43281 561 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 ALOX12BO75342 701 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 GPANK1O95872 356 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 FUT1P19526 365 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 GABRR1P24046 479 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 NAA10P41227 235 aaPredicted RBP17.26■□□□□ 0.35
HMGA1-205ENST00000447654 BPIFB3P59826 476 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 TSTA3Q13630 321 aaPredicted RBP17.26■□□□□ 0.35
HMGA1-205ENST00000447654 SAPCD1Q5SSQ6 148 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 PRAMEF14Q5SWL7 426 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 KCTD9Q7L273 389 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 FAM220AQ7Z4H9 259 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 OR9K2Q8NGE7 335 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 WDR92Q96MX6 357 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 C20orf24Q9BUV8 137 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 PLA2G2FQ9BZM2 168 aa17.26■□□□□ 0.35
HMGA1-205ENST00000447654 SMOC1Q9H4F8 434 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms