RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SERPINA7P05543 415 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 RAC1P63000 192 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 H3F3CQ6NXT2 135 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 CREB3L2Q70SY1 520 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 BIVMQ86UB2 503 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR6M1Q8NGM8 313 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR6N1Q8NGY5 312 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 C20orf85Q9H1P6 137 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GHITMQ9H3K2 345 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 FOXJ2Q9P0K8 574 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 MRPS18BQ9Y676 258 aaKnown RBP12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 CDX4O14627 284 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 RER1O15258 196 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 KDM4BO94953 1096 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 VAMP5O95183 116 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 STOMP27105 288 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 SRD5A2P31213 254 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 GNALP38405 381 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 PSMA6P60900 246 aaKnown RBP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 MAB21L1Q13394 359 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 SF3B4Q15427 424 aaKnown RBP eCLIP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 FCN2Q15485 313 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 SGCAQ16586 387 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 SDK2Q58EX2 2172 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 YRDCQ86U90 279 aaKnown RBP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 BEST3Q8N1M1 668 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR9K2Q8NGE7 335 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR56B4Q8NH76 319 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR14L1PQ8NHC6 308 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 DACT3Q96B18 629 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR2M2Q96R28 347 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 SPRY4Q9C004 299 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 ATG5Q9H1Y0 275 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR51J1Q9H342 316 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 MOB1AQ9H8S9 216 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 ZNF275Q9NSD4 429 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 PAQR5Q9NXK6 330 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 NCKAP5O14513 1909 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 WDFY3Q8IZQ1 3526 aa12.4□□□□□ -0.42
APOBEC3D-202ENST00000427494 TRAV18A0A075B6X5 111 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 A0A1W2PNU3 283 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 CIB4A0PJX0 185 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 AVPR2P30518 371 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 PRKXP51817 358 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 RAG2P55895 527 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 B3GALT5-AS1P59052 145 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 POU4F3Q15319 338 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 GSG1Q2KHT4 349 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 ELFN2Q5R3F8 820 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 PHYHD1Q5SRE7 291 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 CDCP2Q5VXM1 449 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 OLFML2AQ68BL7 652 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAAP20Q6NZ36 180 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 DNM1P46Q6ZS02 220 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 NKAIN3Q8N8D7 197 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 GIMAP1Q8WWP7 306 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 SRXN1Q9BYN0 137 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 ACTR6Q9GZN1 396 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 NIPAL2Q9H841 368 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 CFAP54Q96N23 3096 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 A0A1B0GVI7 797 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 RBBP9O75884 186 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 C1QBP02746 253 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 CD37P11049 281 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 PSMB1P20618 241 aaKnown RBP12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 CDK10Q15131 360 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 ADGRE4PQ86SQ3 457 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 OR51E1Q8TCB6 317 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 BEX1Q9HBH7 125 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 PNRC2Q9NPJ4 139 aaKnown RBP12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 FLVCR2Q9UPI3 526 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 BOLA1Q9Y3E2 137 aa12.39□□□□□ -0.43
APOBEC3D-202ENST00000427494 MUC3AQ02505 3323 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 CCDC187A0A096LP49 1063 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 LRRC3CA6NJW4 275 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 SMLR1H3BR10 107 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 MT-CO3P00414 261 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 F10P00742 488 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ALDOBP05062 364 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 SLC2A1P11166 492 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ENPP1P22413 925 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 BDKRB2P30411 391 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 RCVRNP35243 200 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 DLSTP36957 453 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 CX3CR1P49238 355 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 CYB561P49447 251 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 ZNF121P58317 390 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 OC90Q02509 493 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
APOBEC3D-202ENST00000427494 PCGF3Q3KNV8 242 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms