RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LOC110117498-PIK3R3F6TDL0 507 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PRRG2O14669 202 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SGCEO43556 437 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SYNGR3O43761 229 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 DOK2O60496 412 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SERPINA3P01011 423 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 CGAP01215 116 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 CRHP06850 196 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 HOXD4P09016 255 aaPredicted RBP5.82□□□□□ -1.48
VPS41-204ENST00000413141 MMP7P09237 267 aaPredicted RBP5.82□□□□□ -1.48
VPS41-204ENST00000413141 TMIGD3P0DMS9 266 aaPredicted RBP5.82□□□□□ -1.48
VPS41-204ENST00000413141 EDN3P14138 238 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ZNF32P17041 273 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 COX5AP20674 150 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 CRYGSP22914 178 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 OTX1P32242 354 aaPredicted RBP5.82□□□□□ -1.48
VPS41-204ENST00000413141 TIMP3P35625 211 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SERPINB10P48595 397 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 CX3CR1P49238 355 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PER3P56645 1201 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PCBD1P61457 104 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 TUBA1BP68363 451 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 LY6DQ14210 128 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SLC36A2Q495M3 483 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ELFN2Q5R3F8 820 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 BCL2L15Q5TBC7 163 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ZNF774Q6NX45 483 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ZNF544Q6NX49 715 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PCSK4Q6UW60 755 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 C3P1Q6ZMU1 363 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 Q6ZT83 130 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 TUBA1AQ71U36 451 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 DOLPP1Q86YN1 238 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.82□□□□□ -1.48
VPS41-204ENST00000413141 SKA3Q8IX90 412 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ZNF676Q8N7Q3 588 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 OR1K1Q8NGR3 316 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 FGFBP3Q8TAT2 258 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ABHD4Q8TB40 342 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 STARD4Q96DR4 205 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 KCTD7Q96MP8 289 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 DOCK7Q96N67 2140 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 OR14A2Q96R54 314 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 WACQ9BTA9 647 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SFXN3Q9BWM7 321 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 OR2H1Q9GZK4 316 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 COMMD4Q9H0A8 199 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 WNT5BQ9H1J7 359 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 NIPAL2Q9H841 368 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 GALNT8Q9NY28 637 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PLEK2Q9NYT0 353 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 CCDC59Q9P031 241 aaKnown RBP5.82□□□□□ -1.48
VPS41-204ENST00000413141 ATPIF1Q9UII2 106 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 TINAGQ9UJW2 476 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 OR52A1Q9UKL2 312 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 GTF2A1LQ9UNN4 478 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PROCRQ9UNN8 238 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SLC22A13Q9Y226 551 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 SLC5A6Q9Y289 635 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ZNF281Q9Y2X9 895 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 MED12LQ86YW9 2145 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 TRBV5-5A0A0J9YX44 114 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 LOC107986453A0A1B0GWG9 222 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 SHISA3A0PJX4 238 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ACOD1A6NK06 481 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 TTLL8A6PVC2 850 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ZNF879B4DU55 563 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 RAD51DO75771 328 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 GATBO75879 557 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 UBL3O95164 117 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 IL1AP01583 271 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 IL2RAP01589 272 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 HLA-HP01893 362 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 UCHL1P09936 223 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 PATE4P0C8F1 98 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 UBCP0CG48 685 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 GLI4P10075 376 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 IGHV1-2P23083 117 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ANOS1P23352 680 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 CTSSP25774 331 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 CALRP27797 417 aaKnown RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 CEACAM8P31997 349 aaPredicted RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 PRKXP51817 358 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ZNF121P58317 390 aaPredicted RBP5.81□□□□□ -1.48
VPS41-204ENST00000413141 PSG4Q00888 419 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 RBPJQ06330 500 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ECH1Q13011 328 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 TAF13Q15543 124 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ODF4Q2M2E3 257 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 KRTAP27-1Q3LI81 207 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 TBRG1Q3YBR2 411 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 Q499Y3 187 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 HIKESHIQ53FT3 197 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ACSM3Q53FZ2 586 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ZMAT1Q5H9K5 638 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 SFRP5Q5T4F7 317 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 FAM27D1Q5T7N8 215 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 ANKRD16Q6P6B7 361 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 PAMR1Q6UXH9 720 aa5.81□□□□□ -1.48
VPS41-204ENST00000413141 PRSS45Q7RTY3 260 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms