RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 RAB35Q15286 201 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 Q499Y3 187 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 HSD17B12Q53GQ0 312 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 ELFN2Q5R3F8 820 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 TMEM244Q5VVB8 128 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 NSUN5P2Q63ZY6 315 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 UNQ9370/PRO34162Q6UXP9 181 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 LINC00299Q6ZSB3 139 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 SLC16A14Q7RTX9 510 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 FGD2Q7Z6J4 655 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 SYT9Q86SS6 491 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 TPRA1Q86W33 373 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 PRSS35Q8N3Z0 413 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 TEX19Q8NA77 164 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 AP3S1Q92572 193 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 RNF166Q96A37 237 aaPredicted RBP10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 SLC25A46Q96AG3 418 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 OR14A2Q96R54 314 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 KCNJ15Q99712 375 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 ATF6BQ99941 703 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 SH3GL3Q99963 347 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 C6orf62Q9GZU0 229 aaPredicted RBP10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 HDHD2Q9H0R4 259 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 SLITRK2Q9H156 845 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 TPK1Q9H3S4 243 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 DDX28Q9NUL7 540 aaKnown RBP10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 PLEK2Q9NYT0 353 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 SLC22A13Q9Y226 551 aa10.21□□□□□ -0.77
SNRNP35-202ENST00000412157 CFAP46Q8IYW2 2715 aa10.21□□□□□ -0.78
SNRNP35-202ENST00000412157 A0A075B6Q4 140 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 ARPC4-TTLL3A0A0A6YYG9 625 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 TRBV5-5A0A0J9YX44 114 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PDCD5O14737 125 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 ZNHIT1O43257 154 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 SGCEO43556 437 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 DOK2O60496 412 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 WISP2O76076 250 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PNPP00491 289 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 UCHL1P09936 223 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 CLEC2LP0C7M8 214 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 OCM2P0CE71 109 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 ACHEP22303 614 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 S100A5P33763 92 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 SOX2P48431 317 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 CX3CR1P49238 355 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 MMP16P51512 607 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PRKXP51817 358 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PER3P56645 1201 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 RPS11P62280 158 aaKnown RBP eCLIP10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 HIST1H3AP68431 136 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 ECH1Q13011 328 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 ODF4Q2M2E3 257 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 EIF2S3LQ2VIR3 472 aaKnown RBP10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 SLC36A2Q495M3 483 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 CCDC92Q53HC0 331 aaPredicted RBP10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 C1orf185Q5T7R7 199 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 HIST2H3PS2Q5TEC6 136 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 C9orf135Q5VTT2 229 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 FBXW9Q5XUX1 488 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 HIST2H3AQ71DI3 136 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 CD163Q86VB7 1156 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 GCNT2Q8N0V5 402 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 C9orf106Q8NAJ2 232 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 IL17RDQ8NFM7 739 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 OR6K3Q8NGY3 331 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 RGP1Q92546 391 aaPredicted RBP10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 SPTSSAQ969W0 71 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 DACH2Q96NX9 599 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 KCNS3Q9BQ31 491 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 RNF121Q9H920 327 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 SMURF1Q9HCE7 757 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 NOX4Q9NPH5 578 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 BRD7Q9NPI1 651 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PNRC2Q9NPJ4 139 aaKnown RBP10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 FAM206AQ9NX38 181 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PRSS50Q9UI38 385 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 SLC5A6Q9Y289 635 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 PEX16Q9Y5Y5 336 aa10.2□□□□□ -0.78
SNRNP35-202ENST00000412157 TENM4Q6N022 2769 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 TRAV1-2A0A0B4J238 106 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 IQCMA0A1B0GVH7 501 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 ACOD1A6NK06 481 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 B8ZZF3 427 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 DVL2O14641 736 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 CD2P06729 351 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 ANXA2P07355 339 aaKnown RBP10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 ZNF32P17041 273 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 RAB3BP20337 219 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 CFL1P23528 166 aaKnown RBP10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 MPGP29372 298 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 MOGQ16653 247 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 FAM27D1Q5T7N8 215 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 ZNF324BQ6AW86 544 aaPredicted RBP10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 FAM214BQ7L5A3 538 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 DPPA2Q7Z7J5 298 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 LUZP2Q86TE4 346 aa10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 CISD2Q8N5K1 135 aaKnown RBP10.19□□□□□ -0.78
SNRNP35-202ENST00000412157 CNEP1R1Q8N9A8 125 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms