RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ALG8Q9BVK2 526 aa7.39□□□□□ -1.23
HERC4-203ENST00000395185 MND1Q9BWT6 205 aa7.39□□□□□ -1.23
HERC4-203ENST00000395185 RBM38Q9H0Z9 239 aaKnown RBP7.39□□□□□ -1.23
HERC4-203ENST00000395185 ISG20L2Q9H9L3 353 aaKnown RBP7.39□□□□□ -1.23
HERC4-203ENST00000395185 BATF3Q9NR55 127 aa7.39□□□□□ -1.23
HERC4-203ENST00000395185 ZNF224Q9NZL3 707 aa7.39□□□□□ -1.23
HERC4-203ENST00000395185 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
HERC4-203ENST00000395185 MRM2Q9UI43 246 aaKnown RBP7.39□□□□□ -1.23
HERC4-203ENST00000395185 SF3B6Q9Y3B4 125 aaKnown RBP7.39□□□□□ -1.23
HERC4-203ENST00000395185 INTS1Q8N201 2190 aaKnown RBP7.39□□□□□ -1.23
HERC4-203ENST00000395185 PHF3Q92576 2039 aaKnown RBP7.39□□□□□ -1.23
HERC4-203ENST00000395185 SPTBN1Q01082 2364 aaKnown RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 TRIM64BA6NI03 449 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 METTL15A6NJ78 407 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF587BE7ETH6 402 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 E9PI62 339 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF670-ZNF695F2Z2N8 137 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 TMCC2O75069 709 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF254O75437 659 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SRSF10O75494 262 aaKnown RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF823P16415 610 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 CD53P19397 219 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 PAX7P23759 505 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 HOXC12P31275 282 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 OTX1P32242 354 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 TTKP33981 857 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 LIPAP38571 399 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 OPRL1P41146 370 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 RPS27P42677 84 aaKnown RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 TGM4P49221 684 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF84P51523 738 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SH3BGRP55822 239 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 OR12D2P58182 307 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ADAM8P78325 824 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 MLLT11Q13015 90 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 SSX1Q16384 188 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 CCDC92Q53HC0 331 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 OTPQ5XKR4 325 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 TMPRSS11AQ6ZMR5 421 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 PLEKHG7Q6ZR37 379 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 DPPA2Q7Z7J5 298 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 WFDC8Q8IUA0 241 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SKA3Q8IX90 412 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF679Q8IYX0 411 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SLC22A24Q8N4F4 322 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 KLHL36Q8N4N3 616 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF433Q8N7K0 673 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 OR6N2Q8NGY6 317 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 FGFBP3Q8TAT2 258 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 HAVCR2Q8TDQ0 301 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SPRYD4Q8WW59 207 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 GATAD2BQ8WXI9 593 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 S100PBPQ96BU1 408 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 FBXO17Q96EF6 278 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 PELI1Q96FA3 418 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 PIK3IP1Q96FE7 263 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF75AQ96N20 296 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 FOXN4Q96NZ1 517 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ALKBH3Q96Q83 286 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 MYCBPQ99417 103 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 FOXB1Q99853 325 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ZNF416Q9BWM5 594 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 RERGLQ9H628 205 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 ESRP2Q9H6T0 727 aaKnown RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 EMC7Q9NPA0 242 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 DDX28Q9NUL7 540 aaKnown RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 CHCHD3Q9NX63 227 aaKnown RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 B3GNT2Q9NY97 397 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SLCO1C1Q9NYB5 712 aa7.38□□□□□ -1.23
HERC4-203ENST00000395185 SIRT4Q9Y6E7 314 aaPredicted RBP7.38□□□□□ -1.23
HERC4-203ENST00000395185 RER1O15258 196 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 MAGEB4O15481 346 aaPredicted RBP7.37□□□□□ -1.23
HERC4-203ENST00000395185 PLPP2O43688 288 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 IGHV3-9P01782 118 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 HLA-DQA2P01906 255 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 MT-ND5P03915 603 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 RAF1P04049 648 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 OR8G3PP0DMU2 310 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 CPEP16870 476 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 IGHV1-2P23083 117 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 TGFBR2P37173 567 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 RGS6P49758 472 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 ACTA2P62736 377 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 ACTG2P63267 376 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 FAPQ12884 760 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 MRPL28Q13084 256 aaKnown RBP7.37□□□□□ -1.23
HERC4-203ENST00000395185 AQP6Q13520 282 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 RAB39AQ14964 217 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 PPA1Q15181 289 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 NEDD8Q15843 81 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 GABRA6Q16445 453 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 SGCAQ16586 387 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 TIGD6Q17RP2 521 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 CCDC58Q4VC31 144 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 ARMCX4Q5H9R4 360 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 TIMM23BQ5SRD1 257 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 LIPNQ5VXI9 398 aa7.37□□□□□ -1.23
HERC4-203ENST00000395185 DMKNQ6E0U4 476 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms