RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 H7C1C5 153 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 FADS2O95864 444 aaKnown RBP11.91□□□□□ -0.5
PRPF18-202ENST00000378572 CRYAAP02489 173 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 MT-ND2P03891 347 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 PGA4P0DJD7 388 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 PGA3P0DJD8 388 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 CLUP10909 449 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 ATP6V1B1P15313 513 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 GSTT1P30711 240 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 SELENOPP49908 381 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 CLDN17P56750 224 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 RPS7P62081 194 aaKnown RBP11.91□□□□□ -0.5
PRPF18-202ENST00000378572 LCN6P62502 163 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 HIST3H3Q16695 136 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 OR6V1Q8N148 313 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 NOXO1Q8NFA2 376 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 OR52I1Q8NGK6 324 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 OR1K1Q8NGR3 316 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 NANOS1Q8WY41 292 aaKnown RBP11.91□□□□□ -0.5
PRPF18-202ENST00000378572 NMD3Q96D46 503 aaKnown RBP11.91□□□□□ -0.5
PRPF18-202ENST00000378572 EMC6Q9BV81 110 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 KCNS2Q9ULS6 477 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 B9D1Q9UPM9 204 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 J3QRE1 110 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 ZNF432O94892 652 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 RAB36O95755 333 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-202ENST00000378572 IGHA1P01876 353 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 TFAP2AP05549 437 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 GYPBP06028 91 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 SBK2P0C263 348 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 JUNBP17275 347 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-202ENST00000378572 C21orf33P30042 268 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-202ENST00000378572 GZMKP49863 264 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 ZNF133P52736 654 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-202ENST00000378572 PIGFQ07326 219 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 IRF3Q14653 427 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 TBCEQ15813 527 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-202ENST00000378572 THEM4Q5T1C6 240 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 IL17RELQ6ZVW7 336 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 SORCS2Q96PQ0 1159 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 RBP7Q96R05 134 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 NUAK2Q9H093 628 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 OBP2BQ9NPH6 170 aa11.9□□□□□ -0.5
PRPF18-202ENST00000378572 IGLV1-36A0A0B4J1U3 117 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 DCTN6O00399 190 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 LMX1BO60663 402 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 CTLA4P16410 223 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 PCMT1P22061 227 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 SERPINF1P36955 418 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 RPL5P46777 297 aaKnown RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 CAPZA2P47755 286 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 CLRN1P58418 232 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 FAM166AQ6J272 317 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 WDFY1Q8IWB7 410 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 PROKR2Q8NFJ6 384 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 TSSK2Q96PF2 358 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 OR2M2Q96R28 347 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 MARCH7Q9H992 704 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ADGRL4Q9HBW9 690 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 INPP5EQ9NRR6 644 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 CA10Q9NS85 328 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 EXOSC1Q9Y3B2 195 aaKnown RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 LOC100289279A0A1B0GTE1 492 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 OR6C65A6NJZ3 312 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 KHDRBS3O75525 346 aaKnown RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 UPK3AO75631 287 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 SRD5A1P18405 259 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 HNF1AP20823 631 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 PYCR1P32322 319 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ATP6V1E1P36543 226 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ALDH3B2P48448 385 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ACTC1P68032 377 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ACTA1P68133 377 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ROR2Q01974 943 aaKnown RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 CAMK2DQ13557 499 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 C1QTNF12Q5T7M4 302 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 KCTD8Q6ZWB6 473 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 OR4F15Q8NGB8 312 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 OR51G2Q8NGK0 314 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 OR6K6Q8NGW6 343 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ZNRF4Q8WWF5 429 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 TMEM54Q969K7 222 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 ZMYND19Q96E35 227 aaPredicted RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 CNN2Q99439 309 aaKnown RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 SRA1Q9HD15 236 aaKnown RBP11.89□□□□□ -0.51
PRPF18-202ENST00000378572 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 COMMD3-BMI1R4GMX3 469 aa11.89□□□□□ -0.51
PRPF18-202ENST00000378572 SLC16A7O60669 478 aa11.88□□□□□ -0.51
PRPF18-202ENST00000378572 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
PRPF18-202ENST00000378572 OR4A8P0C604 315 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms