RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SPRYD4Q8WW59 207 aaPredicted RBP7.74□□□□□ -1.17
TPM3-213ENST00000368545 ASB10Q8WXI3 467 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 SIGLEC12Q96PQ1 595 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 DCUN1D5Q9BTE7 237 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 SYT4Q9H2B2 425 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 TRIM36Q9NQ86 728 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 STUB1Q9UNE7 303 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 FREM3P0C091 2139 aa7.74□□□□□ -1.17
TPM3-213ENST00000368545 LOC102725191A0A1B0GVB3 256 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 FAM90A7PA6NKC0 464 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SH2D7A6NKC9 451 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 FAM90A22PA8MWA6 464 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 FAM90A12PA8MX19 464 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 FAM90A23PA8MXZ1 464 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 PRSS44E7EML9 344 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NR4A1P22736 598 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 GDF1P27539 372 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 GABRA5P31644 462 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 UGT2B10P36537 528 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SERPINB10P48595 397 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 VBP1P61758 197 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 TUBA1BP68363 451 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 GPR50Q13585 617 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 ATP1A1-AS1Q5TC04 95 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 LIPKQ5VXJ0 399 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 LINC00696Q6ZRV3 163 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 TUBA1AQ71U36 451 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SLC35D2Q76EJ3 337 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SLC16A9Q7RTY1 509 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SYS1Q8N2H4 156 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 HAVCR2Q8TDQ0 301 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 TM9SF4Q92544 642 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 ZHX1-C8orf76Q96EF9 292 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 KLHL15Q96M94 604 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 OXGR1Q96P68 337 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 TBX5Q99593 518 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 COQ7Q99807 217 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NAA11Q9BSU3 229 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 RASD1Q9Y272 281 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 PMF1-BGLAPU3KQ54 211 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NOTCH2Q04721 2471 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 A0A1W2PQL4 384 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 SLC22A23A1A5C7 686 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 KLRC4-KLRK1H3BQV0 150 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 H7C1C5 153 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 UBE2CO00762 179 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 PHYHO14832 338 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NME2P1O60361 137 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 VAMP5O95183 116 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 TFP02787 698 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SPARCP09486 303 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 PRKAR1AP10644 381 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NR2C1P13056 603 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 HLA-DOBP13765 273 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 ZNF182P17025 639 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 SHC1P29353 583 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NAA10P41227 235 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 P2RY4P51582 365 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 NCS1P62166 190 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 LCN6P62502 163 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 ZNF85Q03923 595 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SRSF6Q13247 344 aaKnown RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 MELKQ14680 651 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 CDONQ4KMG0 1287 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 PM20D2Q8IYS1 436 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 OR6V1Q8N148 313 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 GHDCQ8N2G8 530 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 MDS2Q8NDY4 140 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 OR51L1Q8NGJ5 315 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 FNDC8Q8TC99 324 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 HAS2Q92819 552 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 RPL3LQ92901 407 aaKnown RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 SFXN2Q96NB2 322 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 OR51E2Q9H255 320 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 ZNF703Q9H7S9 590 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 MARCH7Q9H992 704 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 BEX4Q9NWD9 120 aaPredicted RBP7.73□□□□□ -1.17
TPM3-213ENST00000368545 BABAM2Q9NXR7 383 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 QPCTLQ9NXS2 382 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 B3GAT1Q9P2W7 334 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 SSR3Q9UNL2 185 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 TMEM14AQ9Y6G1 99 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 LRRK2Q5S007 2527 aa7.73□□□□□ -1.17
TPM3-213ENST00000368545 LOC100506127A0A0U1RQW1 187 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 KIAA1324LA8MWY0 1029 aaPredicted RBP7.72□□□□□ -1.17
TPM3-213ENST00000368545 CENPBD1B2RD01 187 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 ZNF670-ZNF695F2Z2N8 137 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 F10P00742 488 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 SP1P08047 785 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 RFPL3SP0C7P2 107 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 RNF224P0DH78 156 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 ZNF43P17038 809 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 AGAP20933 346 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 GALP22466 123 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 PYCR1P32322 319 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 CD79BP40259 229 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 B3GALT5-AS1P59052 145 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 LSM3P62310 102 aaKnown RBP7.72□□□□□ -1.17
TPM3-213ENST00000368545 ARG2P78540 354 aa7.72□□□□□ -1.17
TPM3-213ENST00000368545 H3F3AP84243 136 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms