RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TINAGQ9UJW2 476 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 RTTNQ86VV8 2226 aa15.9■□□□□ 0.14
SMARCD3-202ENST00000356800 TMEM212A6NML5 194 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 GATBO75879 557 aaKnown RBP15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 CDRT1O95170 752 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 CGAP01215 116 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 H2BFMP0C1H6 154 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 TMIGD3P0DMS9 266 aaPredicted RBP15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 GLI4P10075 376 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 MPGP29372 298 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 CEACAM8P31997 349 aaPredicted RBP15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 DCTDP32321 178 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 SDC2P34741 201 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF404Q494X3 552 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 PRSS35Q8N3Z0 413 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 GJC3Q8NFK1 279 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ZFAND2BQ8WV99 257 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 PHYHIPQ92561 330 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 SLC25A46Q96AG3 418 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 C4orf45Q96LM5 186 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 MMP27Q9H306 513 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 PLSCR4Q9NRQ2 329 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF224Q9NZL3 707 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 A0A096LPE4 126 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 A0A1W2PPZ6 126 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 OR4C45A6NMZ5 311 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF878C9JN71 531 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 DVL2O14641 736 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 CRHP06850 196 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 PEX19P40855 299 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 KIR3DL2P43630 455 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 RORCP51449 518 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF544Q6NX49 715 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ABHD12BQ7Z5M8 362 aaPredicted RBP15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 CEACAM19Q7Z692 300 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 OR5AK2Q8NH90 309 aa15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 DDX28Q9NUL7 540 aaKnown RBP15.89■□□□□ 0.13
SMARCD3-202ENST00000356800 ARPC4-TTLL3A0A0A6YYG9 625 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 IL2RAP01589 272 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 MMP7P09237 267 aaPredicted RBP15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF32P17041 273 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 MTNR1BP49286 362 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 ZMAT1Q5H9K5 638 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 WDR38Q5JTN6 314 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 UNQ9370/PRO34162Q6UXP9 181 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 SLC16A14Q7RTX9 510 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 IL17RDQ8NFM7 739 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 OR13C5Q8NGS8 318 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 MCFD2Q8NI22 146 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 PPP1R14AQ96A00 147 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 ZFP3Q96NJ6 502 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 SNTG1Q9NSN8 517 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 SLC5A6Q9Y289 635 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 R4GMQ9 66 aa15.88■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF503-AS2A6NEH8 195 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 FARS2O95363 451 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 IGHV1-2P23083 117 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 MMP16P51512 607 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 MOGQ16653 247 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 RSPO1Q2MKA7 263 aaPredicted RBP15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 Q6ZT83 130 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 SYT9Q86SS6 491 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 CATSPERDQ86XM0 798 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 OR1K1Q8NGR3 316 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 RGP1Q92546 391 aaPredicted RBP15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 BCL2L2Q92843 193 aaPredicted RBP15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 BARHL1Q9BZE3 327 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 COMMD4Q9H0A8 199 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 PPIL3Q9H2H8 161 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 NIPAL2Q9H841 368 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 SLC22A13Q9Y226 551 aa15.87■□□□□ 0.13
SMARCD3-202ENST00000356800 SHISA3A0PJX4 238 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 CNOT4O95628 575 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 UCHL1P09936 223 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 CALRP27797 417 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 PSG4Q00888 419 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 RBPJQ06330 500 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 EIF2S3LQ2VIR3 472 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 ELFN2Q5R3F8 820 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF774Q6NX45 483 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 ZNF610Q8N9Z0 462 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 CNTNAP3BQ96NU0 1288 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 ATF6BQ99941 703 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 CNTNAP3Q9BZ76 1288 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 OR2H1Q9GZK4 316 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 WNT5BQ9H1J7 359 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 OPN3Q9H1Y3 402 aaPredicted RBP15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 G6PC2Q9NQR9 355 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 FAM206AQ9NX38 181 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 SH3BGRL2Q9UJC5 107 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 A0A075B6Q4 140 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 TMEM269A0A1B0GVZ9 245 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 CASKO14936 926 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 SGCEO43556 437 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 SYNGR3O43761 229 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 ARL6IP5O75915 188 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 INHBBP09529 407 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 MXD1Q05195 221 aa15.86■□□□□ 0.13
SMARCD3-202ENST00000356800 SCRN3Q0VDG4 424 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms