RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 PDGFAP04085 211 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 ANXA2P07355 339 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 FAM87AP0C7U9 286 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 B4GALT1P15291 398 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 KIR3DL2P43630 455 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 SLC6A9P48067 706 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 SOX2P48431 317 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 CX3CR1P49238 355 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PRKXP51817 358 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PER3P56645 1201 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PSMA6P60900 246 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 GALK2Q01415 458 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 TGFBR3Q03167 851 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 ENDOGQ14249 297 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 ZNF433Q8N7K0 673 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 OR5M9Q8NGP3 310 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 NANOS1Q8WY41 292 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PGAM5Q96HS1 289 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 DERL3Q96Q80 235 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 DCLRE1CQ96SD1 692 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 SLC30A2Q9BRI3 323 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PBOV1Q9GZY1 135 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PRORYQ9H606 182 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 SLC24A3Q9HC58 644 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 SLC7A10Q9NS82 523 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 COMMD3Q9UBI1 195 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PLEKHB1Q9UF11 243 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 SLC5A6Q9Y289 635 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 TP53TG5Q9Y2B4 290 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 N6AMT1Q9Y5N5 214 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 PMF1-BGLAPU3KQ54 211 aa10.03□□□□□ -0.8
CTDSPL-202ENST00000310189 ZFHX4Q86UP3 3567 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 DNAJC13O75165 2243 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 ZNF407Q9C0G0 2248 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 CFAP47Q6ZTR5 3102 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 DMXL2Q8TDJ6 3036 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 SYT7O43581 403 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 DOK2O60496 412 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 SS18L1O75177 396 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 CTSSP25774 331 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 CD40LGP29965 261 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 AGTR1P30556 359 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 TALDO1P37837 337 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 HIST1H3AP68431 136 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 MFGE8Q08431 387 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FAPQ12884 760 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 EIF2S3LQ2VIR3 472 aaKnown RBP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 PLEKHN1Q494U1 663 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 HIST2H3PS2Q5TEC6 136 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FBXW9Q5XUX1 488 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 TMEM53Q6P2H8 277 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 ZNF585AQ6P3V2 769 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 SFXN4Q6P4A7 337 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 HIST2H3AQ71DI3 136 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FAM214BQ7L5A3 538 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FGD2Q7Z6J4 655 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 SIAH3Q8IW03 269 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 ELMOD2Q8IZ81 293 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 CCDC54Q8NEL0 328 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 ZNF671Q8TAW3 534 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 GPR137Q96N19 417 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 TAAR6Q96RI8 345 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 SH3GL3Q99963 347 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 BARHL1Q9BZE3 327 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 C12orf49Q9H741 205 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 AKIP1Q9NQ31 210 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FAM206AQ9NX38 181 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 NUFIP1Q9UHK0 495 aaKnown RBP10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 TUBD1Q9UJT1 453 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 FBXL3Q9UKT7 428 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 LHX6Q9UPM6 363 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 SLC22A13Q9Y226 551 aa10.02□□□□□ -0.81
CTDSPL-202ENST00000310189 TNRC6AQ8NDV7 1962 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 LOC107986453A0A1B0GWG9 222 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 SMIM30A4D0T7 59 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 MEGF11A6BM72 1044 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 OR6C6A6NF89 314 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 FAM25AB3EWG3 89 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 FAM25CB3EWG5 89 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 FAM25GB3EWG6 89 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 F5H5K5 113 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 K7EM74 188 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 CTDSP2O14595 271 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 WDR1O75083 606 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 SRSF10O75494 262 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 TGM6O95932 706 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 PNPP00491 289 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 IGHV3-9P01782 118 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 ZNF20P17024 532 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 NTF4P34130 210 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 ARR3P36575 388 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 OR3A2P47893 321 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 PPP5CP53041 499 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 ARF1P84077 181 aaKnown RBP10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 PLP2Q04941 152 aa10.01□□□□□ -0.81
CTDSPL-202ENST00000310189 LINC00303Q3SY05 128 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms