RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CLDN15P56746 228 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CLDN20P56880 219 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 MRPS10P82664 201 aaKnown RBP8.1□□□□□ -1.11
PDPN-201ENST00000294489 RNASE12Q5GAN4 147 aaKnown RBP8.1□□□□□ -1.11
PDPN-201ENST00000294489 YRDCQ86U90 279 aaKnown RBP8.1□□□□□ -1.11
PDPN-201ENST00000294489 IZUMO1Q8IYV9 350 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 UBASH3BQ8TF42 649 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 PNPLA2Q96AD5 504 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 SFXN2Q96NB2 322 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 C7orf50Q9BRJ6 194 aaKnown RBP8.1□□□□□ -1.11
PDPN-201ENST00000294489 MARVELD1Q9BSK0 173 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 SRXN1Q9BYN0 137 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 ZNF221Q9UK13 617 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CACNA1CQ13936 2221 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 FREM3P0C091 2139 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 IGHV3-15A0A0B4J1V0 119 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 OR5H15A6NDH6 313 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 TRAPPC6AO75865 159 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SP1P08047 785 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ADRB1P08588 477 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 RAB11BQ15907 218 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 TATDN3Q17R31 274 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ATP1A1-AS1Q5TC04 95 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ABLIM2Q6H8Q1 611 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SERPINA12Q8IW75 414 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 TMEM123Q8N131 208 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ZIC4Q8N9L1 334 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 OR9K2Q8NGE7 335 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 MOB1AQ9H8S9 216 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 FAM206AQ9NX38 181 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ASH2LQ9UBL3 628 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 N6AMT1Q9Y5N5 214 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 LHFPL6Q9Y693 200 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 GABARAPH6UMI1 98 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SLC17A2O00624 439 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 CEACAM4O75871 244 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 TPPPO94811 219 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 WT1P19544 449 aaPredicted RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 SRP9P49458 86 aaKnown RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 AP3S2P59780 193 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 CLN3Q13286 438 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SLC36A2Q495M3 483 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 C10orf128Q5T292 105 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 CFAP77Q6ZQR2 320 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 PRSS45Q7RTY3 260 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 GLCCI1Q86VQ1 547 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 FCAMRQ8WWV6 532 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 PHF21AQ96BD5 680 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 INTS12Q96CB8 462 aaKnown RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 UCN2Q96RP3 112 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 DPAGT1Q9H3H5 408 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ZNF552Q9H707 407 aaPredicted RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 INMT-MINDY4F8WBC2 141 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 H0YC42 278 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 P2RY10O00398 339 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SMAD9O15198 467 aaKnown RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 ECDO95905 644 aaPredicted RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 ENPP1P22413 925 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 GDF1P27539 372 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 HLA-DMAP28067 261 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 CARD18P57730 90 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 LSM6P62312 80 aaKnown RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 DYRK1AQ13627 763 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SLC25A25Q6KCM7 469 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 SIAH3Q8IW03 269 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ELMOD2Q8IZ81 293 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 OR6F1Q8NGZ6 308 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 UPRTQ96BW1 309 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 ZNF385AQ96PM9 386 aaKnown RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 OR2M2Q96R28 347 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 TTTY12Q9BZ98 90 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 PBOV1Q9GZY1 135 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 TAS2R4Q9NYW5 299 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 COPZ2Q9P299 210 aa8.09□□□□□ -1.11
PDPN-201ENST00000294489 FOXD3Q9UJU5 478 aaPredicted RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 KLF13Q9Y2Y9 288 aaPredicted RBP8.09□□□□□ -1.11
PDPN-201ENST00000294489 MED13Q9UHV7 2174 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 SYT7O43581 403 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 KRT33AO76009 404 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 ITGA5P08648 1049 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 IGFBP3P17936 291 aaPredicted RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 CDK2P24941 298 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 GDNFP39905 211 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 MNDAP41218 407 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 PSMA6P60900 246 aaKnown RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 SNTB2Q13425 540 aaKnown RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 SGCAQ16586 387 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 WIPI1Q5MNZ9 446 aaPredicted RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 ZBTB8BQ8NAP8 495 aaPredicted RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 ZFP62Q8NB50 900 aaPredicted RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 PLPP7Q8NBV4 271 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 OR51D1Q8NGF3 324 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 OR10S1Q8NGN2 331 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 OR2V1Q8NHB1 315 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 HES7Q9BYE0 225 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 DIABLOQ9NR28 239 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 PLA2G3Q9NZ20 509 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 LOC100289279A0A1B0GTE1 492 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 ARGFXA6NJG6 315 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms