RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Pde12Q3TIU4 608 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 DhpsQ3TXU5 369 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Xkr5Q5GH66 676 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Q8BPC6 396 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r38Q8R2E1 302 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Dusp15Q8R4V2 235 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 RfxapQ8VCG9 231 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ccdc115Q8VE99 180 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Carhsp1Q9CR86 148 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Snapc3Q9D2C9 407 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gm6880A3KG45 208 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Rab24P35290 203 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 FrzbP97401 323 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vwa5b2Q3UR50 1248 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Slc34a1Q60825 637 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 LipkQ8BM14 398 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ctdsp2Q8BX07 270 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 4930451G09RikQ8C5G4 195 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Q8R2K8 148 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr160Q8VGE3 309 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gfod2Q9CYH5 385 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Trhr2Q9ERT2 382 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Wif1Q9WUA1 379 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gys1Q9Z1E4 738 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fam98cE9PYD1 344 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Zfp961E9Q4R5 444 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mesp2O08574 370 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Klrk1O54709 232 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 LhcgrP30730 700 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Csrp3P50462 194 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Tnfsf10P50592 291 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Nup43P59235 380 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Rims4P60191 269 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Polr2gP62488 172 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gbx1P82976 418 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 FapP97321 761 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Htr1fQ02284 366 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 F13bQ07968 669 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 NfkbidQ2TB02 327 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mmp25Q3U435 615 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mansc4Q3UU94 337 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 PiglQ5SX19 252 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Thoc6Q5U4D9 341 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Elavl4Q61701 385 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Meig1Q61845 88 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 ScapQ6GQT6 1276 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Acaa1bQ8VCH0 424 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr1298Q8VGE6 312 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Acaa1aQ921H8 424 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Uqcc1Q9CWU6 295 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Rpl22l1Q9D7S7 122 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Lman2Q9DBH5 358 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Chrnb2Q9ERK7 501 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Csnk1eQ9JMK2 416 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 ClnkQ9QZE2 435 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r82A0A087WRV1 305 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Zfp442A2AQA0 667 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gm4177D3YTX5 305 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Chst13D3Z6E3 336 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gm45711E0CXA2 391 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr914E9PW59 316 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r60G3UY47 300 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r142K7N6U0 305 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r103K7N6X7 305 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r151L7N288 305 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr329-psM9MMK4 331 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Dnmt3bO88509 859 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 F2rl3O88634 396 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 En1P09065 401 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Csn2P10598 231 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Foxk2Q3UCQ1 651 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr594Q7TRR4 311 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 HeltQ7TS99 240 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 2610318N02RikQ80VT5 305 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fam124bQ8BLQ0 456 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Sall4Q8BX22 1067 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mbtps2Q8CHX6 515 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Sidt2Q8CIF6 832 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Glcci1Q8K3I9 537 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Abhd4Q8VD66 342 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 TctaQ8VEA7 122 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr525Q8VGL5 309 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 RragcQ99K70 398 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Hrasls5Q9CPX5 270 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Trp53tg5Q9D976 238 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Samd8Q9DA37 478 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Notch3Q61982 2318 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Tfb2mQ3TL26 396 aaKnown RBP4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr774Q7TRI5 312 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Npsr1Q8BZP8 371 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Scmh1Q8K214 706 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Scgb2b27Q8R1E9 112 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r208Q8R275 308 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr380Q8VGT3 311 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr659Q8VGV6 322 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mob1aQ921Y0 216 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 CutcQ9D8X1 272 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vstm2bQ9JME9 285 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Lrit3W8DXL4 681 aa4.22□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Polr2aP08775 1970 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms