RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 TRIB1Q96RU8 372 aa6.16□□□□□ -1.42
CBWD3-219ENST00000622817 PDCD1LG2Q9BQ51 273 aa6.16□□□□□ -1.42
CBWD3-219ENST00000622817 COMMD4Q9H0A8 199 aa6.16□□□□□ -1.42
CBWD3-219ENST00000622817 ZNF71Q9NQZ8 489 aaPredicted RBP6.16□□□□□ -1.42
CBWD3-219ENST00000622817 FRRS1LQ9P0K9 344 aa6.16□□□□□ -1.42
CBWD3-219ENST00000622817 R4GMQ9 66 aa6.16□□□□□ -1.42
CBWD3-219ENST00000622817 A3GALT2U3KPV4 340 aa6.16□□□□□ -1.42
CBWD3-219ENST00000622817 ARPC4-TTLL3A0A0A6YYG9 625 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 OR4C45A6NMZ5 311 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 C1QTNF9BB2RNN3 333 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 ZNF878C9JN71 531 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 RER1O15258 196 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 SS18L1O75177 396 aaPredicted RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 SC5DO75845 299 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 CDRT1O95170 752 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 FARS2O95363 451 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 WNT11O96014 354 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 FAM87AP0C7U9 286 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 C1QTNF9P0C862 333 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 AGTR1P30556 359 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 PTGER4P35408 488 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 RPS19P39019 145 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 PCBD1P61457 104 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 GRB2P62993 217 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 HIST1H3AP68431 136 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 ACSF3Q4G176 576 aaPredicted RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 HIST2H3PS2Q5TEC6 136 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 ZNF324BQ6AW86 544 aaPredicted RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 OR2A2Q6IF42 318 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 KLHL24Q6TFL4 600 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 HIST2H3AQ71DI3 136 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 LINGO2Q7L985 606 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 NUFIP2Q7Z417 695 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 ABHD12BQ7Z5M8 362 aaPredicted RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 CATSPERDQ86XM0 798 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 UBE2J2Q8N2K1 259 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 SLC22A24Q8N4F4 322 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 ZNF676Q8N7Q3 588 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 OR10S1Q8NGN2 331 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 HSD17B8Q92506 261 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 HTRA1Q92743 480 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 DCLRE1CQ96SD1 692 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 FOXB1Q99853 325 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 WACQ9BTA9 647 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 SLIRPQ9GZT3 109 aaKnown RBP6.15□□□□□ -1.42
CBWD3-219ENST00000622817 SLC7A10Q9NS82 523 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 SNTG1Q9NSN8 517 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 LUZP4Q9P127 313 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 UPB1Q9UBR1 384 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 EMC9Q9Y3B6 208 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 DCHS1Q96JQ0 3298 aa6.15□□□□□ -1.42
CBWD3-219ENST00000622817 PHF3Q92576 2039 aaKnown RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 TMEM269A0A1B0GVZ9 245 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ZNF879B4DU55 563 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 LOC110117498-PIK3R3F6TDL0 507 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 SRSF10O75494 262 aaKnown RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ARL6IP5O75915 188 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 PNPP00491 289 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 IGHV3-9P01782 118 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 HOXD4P09016 255 aaPredicted RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 GABRA1P14867 456 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 B4GALT1P15291 398 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 MYL9P24844 172 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 MAPK3P27361 379 aaPredicted RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 HSD11B1P28845 292 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 SDC2P34741 201 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 KIR3DL2P43630 455 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 OR3A2P47893 321 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 MTNR1BP49286 362 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 RORCP51449 518 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 RPS11P62280 158 aaKnown RBP eCLIP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ARF1P84077 181 aaKnown RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ECH1Q13011 328 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 INSL4Q14641 139 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 LINC00303Q3SY05 128 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ZNF404Q494X3 552 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ZMAT1Q5H9K5 638 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 WDR38Q5JTN6 314 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 NSUN5P2Q63ZY6 315 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ZNF585AQ6P3V2 769 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 UNQ9370/PRO34162Q6UXP9 181 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ZNF813Q6ZN06 617 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 ZNF704Q6ZNC4 412 aaPredicted RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 LINC00299Q6ZSB3 139 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 FGD2Q7Z6J4 655 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 SYT9Q86SS6 491 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 TPRA1Q86W33 373 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 PRSS35Q8N3Z0 413 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 LRRC18Q8N456 261 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 OR13C5Q8NGS8 318 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 MCFD2Q8NI22 146 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 TBC1D15Q8TC07 691 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 GPR148Q8TDV2 347 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 THRSPQ92748 146 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 SLC25A46Q96AG3 418 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 MMP27Q9H306 513 aa6.15□□□□□ -1.43
CBWD3-219ENST00000622817 PNRC2Q9NPJ4 139 aaKnown RBP6.15□□□□□ -1.43
CBWD3-219ENST00000622817 DDX28Q9NUL7 540 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms