RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 MARVELD1Q9BSK0 173 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 MRI1Q9BV20 369 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 ZNF221Q9UK13 617 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 FOXJ3Q9UPW0 622 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 ALG5Q9Y673 324 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 EP300Q09472 2414 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-211ENST00000604367 LOC102725191A0A1B0GVB3 256 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 RER1O15258 196 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 EIF1BO60739 113 aaKnown RBP13.37□□□□□ -0.27
CCDC12-211ENST00000604367 TNFSF15O95150 251 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 WDPCPO95876 746 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 ZNF17P17021 662 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 SRD5A2P31213 254 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 BTCP35070 178 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 PRKXP51817 358 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 CBX3Q13185 183 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 ATAD3CQ5T2N8 411 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 CREB3L2Q70SY1 520 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 HAVCR1Q96D42 359 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 CDC6Q99741 560 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
CCDC12-211ENST00000604367 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 HMX3A6NHT5 357 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 CENPXA8MT69 81 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 INMT-MINDY4F8WBC2 141 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-211ENST00000604367 ORC5O43913 435 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 SLC2A1P11166 492 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 GDNFP39905 211 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 STARP49675 285 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 MMP16P51512 607 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 CSNK2A1P68400 391 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-211ENST00000604367 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 PLA1AQ53H76 456 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 WIPI1Q5MNZ9 446 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-211ENST00000604367 PHYHD1Q5SRE7 291 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 ZNF704Q6ZNC4 412 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-211ENST00000604367 LUZP2Q86TE4 346 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 ZBTB8BQ8NAP8 495 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-211ENST00000604367 OR52I2Q8NH67 350 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 RAB40AQ8WXH6 277 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 FAM206AQ9NX38 181 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 GLTPQ9NZD2 209 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 ETV7Q9Y603 341 aa13.36□□□□□ -0.27
CCDC12-211ENST00000604367 PINLYPA6NC86 204 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 LRRC3CA6NJW4 275 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 TMEM127O75204 238 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 MT-ND4P03905 459 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 HSD11B1P28845 292 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 CSNK1A1P48729 337 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 PTH2RP49190 550 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 POU3F4P49335 361 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 EFNB2P52799 333 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 B3GALT5-AS1P59052 145 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 GABREP78334 506 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 SPOCK1Q08629 439 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 TAF13Q15543 124 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 SGCAQ16586 387 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 OR9K2Q8NGE7 335 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 ST6GAL2Q96JF0 529 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 NAA11Q9BSU3 229 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-211ENST00000604367 PBOV1Q9GZY1 135 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 KLK11Q9UBX7 282 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 CGGBP1Q9UFW8 167 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-211ENST00000604367 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 CTDSPLO15194 276 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 TTRP02766 147 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 ISG15P05161 165 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 ACSM4P0C7M7 580 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 ACHEP22303 614 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 GIFP27352 417 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 SELENOPP49908 381 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 EIF3IQ13347 325 aaKnown RBP13.35□□□□□ -0.27
CCDC12-211ENST00000604367 KCNJ8Q15842 424 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 C2orf76Q3KRA6 126 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 HACD4Q5VWC8 232 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 SFXN2Q96NB2 322 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 GPR87Q9BY21 358 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 DDX28Q9NUL7 540 aaKnown RBP13.35□□□□□ -0.27
CCDC12-211ENST00000604367 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 IL17BQ9UHF5 180 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 CDV3Q9UKY7 258 aaKnown RBP13.35□□□□□ -0.27
CCDC12-211ENST00000604367 RABL2BQ9UNT1 228 aa13.35□□□□□ -0.27
CCDC12-211ENST00000604367 GJE1A6NN92 205 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 ZNF878C9JN71 531 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
CCDC12-211ENST00000604367 CSRP1P21291 193 aaKnown RBP13.34□□□□□ -0.27
CCDC12-211ENST00000604367 ITGA3P26006 1051 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 RFC3P40938 356 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 CCR6P51684 374 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 CD83Q01151 205 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
CCDC12-211ENST00000604367 RAB11BQ15907 218 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 GLYATL3Q5SZD4 288 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 CREB3L1Q96BA8 519 aa13.34□□□□□ -0.27
CCDC12-211ENST00000604367 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms