RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 CEACAM19Q7Z692 300 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 NABP1Q96AH0 204 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 MAP6Q96JE9 813 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 ZNF416Q9BWM5 594 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
IRF3-229ENST00000601373 MMP27Q9H306 513 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 CLCF1Q9UBD9 225 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 ASH2LQ9UBL3 628 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 R4GMQ9 66 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
IRF3-229ENST00000601373 OR4C45A6NMZ5 311 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 LRRTM2O43300 516 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 FARS2O95363 451 aaKnown RBP12.07□□□□□ -0.48
IRF3-229ENST00000601373 TGM6O95932 706 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 CST2P09228 141 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 SFTPCP11686 197 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 RPS19P39019 145 aaKnown RBP12.07□□□□□ -0.48
IRF3-229ENST00000601373 MTNR1BP49286 362 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 MMP16P51512 607 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 PCBD1P61457 104 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 ENDOGQ14249 297 aaKnown RBP12.07□□□□□ -0.48
IRF3-229ENST00000601373 TAF13Q15543 124 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 CEACAM16Q2WEN9 425 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 TSPO2Q5TGU0 170 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 OR2A2Q6IF42 318 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 OR7E24Q6IFN5 339 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 SPATC1Q76KD6 591 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 SYT9Q86SS6 491 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 ZNF100Q8IYN0 542 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 ZNF676Q8N7Q3 588 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 MCFD2Q8NI22 146 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 PHF3Q92576 2039 aaKnown RBP12.07□□□□□ -0.48
IRF3-229ENST00000601373 WNT2BQ93097 391 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 GPR137Q96N19 417 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 FOXB1Q99853 325 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
IRF3-229ENST00000601373 PTPN13Q12923 2485 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 TMEM269A0A1B0GVZ9 245 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 ZNF587BE7ETH6 402 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 CASKO14936 926 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 SS18L1O75177 396 aaPredicted RBP12.06□□□□□ -0.48
IRF3-229ENST00000601373 ZFPL1O95159 310 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 APOC1P02654 83 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 GABRA1P14867 456 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 MYL9P24844 172 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 CTSSP25774 331 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 MAPK3P27361 379 aaPredicted RBP12.06□□□□□ -0.48
IRF3-229ENST00000601373 HSD11B1P28845 292 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 SDC2P34741 201 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 PTGER4P35408 488 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 GRB2P62993 217 aaKnown RBP12.06□□□□□ -0.48
IRF3-229ENST00000601373 SCRN3Q0VDG4 424 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 MOGQ16653 247 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 ZMAT1Q5H9K5 638 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 WDR38Q5JTN6 314 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 TPRA1Q86W33 373 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 CATSPERDQ86XM0 798 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 TBC1D15Q8TC07 691 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 SLC25A46Q96AG3 418 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 ALKBH3Q96Q83 286 aaPredicted RBP12.06□□□□□ -0.48
IRF3-229ENST00000601373 TRIB1Q96RU8 372 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 PDCD1LG2Q9BQ51 273 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 NXF2Q9GZY0 626 aaKnown RBP12.06□□□□□ -0.48
IRF3-229ENST00000601373 MOB1AQ9H8S9 216 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 SLC7A10Q9NS82 523 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 SNTG1Q9NSN8 517 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 CRNNQ9UBG3 495 aaPredicted RBP12.06□□□□□ -0.48
IRF3-229ENST00000601373 CLEC4AQ9UMR7 237 aa12.06□□□□□ -0.48
IRF3-229ENST00000601373 PIEZO2Q9H5I5 2752 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 A0A075B6Q4 140 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 TRAV1-2A0A0B4J238 106 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 ACOD1A6NK06 481 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 LOC110117498-PIK3R3F6TDL0 507 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 SRSF10O75494 262 aaKnown RBP12.05□□□□□ -0.48
IRF3-229ENST00000601373 AGTR1P30556 359 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 RPS11P62280 158 aaKnown RBP eCLIP12.05□□□□□ -0.48
IRF3-229ENST00000601373 SRSF1Q07955 248 aaKnown RBP eCLIP12.05□□□□□ -0.487e-7■■□□□ 14.5
IRF3-229ENST00000601373 ECH1Q13011 328 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 Q499Y3 187 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 PLXDC2Q6UX71 529 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
IRF3-229ENST00000601373 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 LINGO2Q7L985 606 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 NUFIP2Q7Z417 695 aaKnown RBP12.05□□□□□ -0.48
IRF3-229ENST00000601373 CROCCP3Q8IVE0 287 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 PRSS35Q8N3Z0 413 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 LRRC18Q8N456 261 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 OR10S1Q8NGN2 331 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 HSD17B8Q92506 261 aa12.05□□□□□ -0.48
IRF3-229ENST00000601373 ZNF837Q96EG3 531 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms