RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 RAB2BQ8WUD1 216 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ZFAND2BQ8WV99 257 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 SLC7A6Q92536 515 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 RORBQ92753 470 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 RADILQ96JH8 1075 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 SLC38A2Q96QD8 506 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 IL4I1Q96RQ9 567 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 TSC22D3Q99576 134 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ALG12Q9BV10 488 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 FUNDC2Q9BWH2 189 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 HDHD5Q9BXW7 423 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 NAA50Q9GZZ1 169 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 OR10A4Q9H209 315 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 SRA1Q9HD15 236 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 AMBNQ9NP70 447 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 FGF20Q9NP95 211 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 B3GAT2Q9NPZ5 323 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 TVP23BQ9NYZ1 205 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 DNAJC27Q9NZQ0 273 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 VSX1Q9NZR4 365 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 FZR1Q9UM11 496 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 DIMT1Q9UNQ2 313 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 BAIAP2Q9UQB8 552 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 AMDHD2Q9Y303 409 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 RPL36Q9Y3U8 105 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 RNF115Q9Y4L5 304 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 HEATR1Q9H583 2144 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 DSCAMO60469 2012 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 IGHV2OR16-5A0A0B4J2B6 119 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 IRGMA1A4Y4 181 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 A6NIZ1 184 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 OR6C65A6NJZ3 312 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 J3QRE1 110 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 XKRYO14609 159 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 TLX2O43763 284 aaPredicted RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 AHCYL1O43865 530 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ATE1O95260 518 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 FADS2O95864 444 aaKnown RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 PTHP01270 115 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 IGKV3-15P01624 115 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 IGLV1-44P01699 117 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 CD3EP07766 207 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 SOD3P08294 240 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 PAX7P23759 505 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 APEX1P27695 318 aaKnown RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 RBMXP38159 391 aaKnown RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 CENPAP49450 140 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 PRSS12P56730 875 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 RAP1BP61224 184 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 RAP1AP62834 184 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 NAAAQ02083 359 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 TGFBR3Q03167 851 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 HGFACQ04756 655 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 RAB40BQ12829 278 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 AQP6Q13520 282 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 SNAPC1Q16533 368 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 GSG1Q2KHT4 349 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF672Q499Z4 452 aaPredicted RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 TMEM255AQ5JRV8 349 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 NXNL2Q5VZ03 156 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF774Q6NX45 483 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 PAMR1Q6UXH9 720 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF627Q7L945 461 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF367Q7RTV3 350 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 SLC16A14Q7RTX9 510 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 CDH24Q86UP0 819 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF485Q8NCK3 441 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 CPEB3Q8NE35 698 aaKnown RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 OR52L1Q8NGH7 329 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 C11orf40Q8WZ69 217 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 MUCL1Q96DR8 90 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 DDOQ99489 341 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF649Q9BS31 505 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF416Q9BWM5 594 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 WNT5BQ9H1J7 359 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 POFUT1Q9H488 388 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 HINT3Q9NQE9 182 aaKnown RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 POLE4Q9NR33 117 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 CMC2Q9NRP2 79 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 MRPL22Q9NWU5 206 aaKnown RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 CRNNQ9UBG3 495 aaPredicted RBP6.85□□□□□ -1.31
CCDC40-215ENST00000576033 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
CCDC40-215ENST00000576033 RTTNQ86VV8 2226 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 HS3ST1O14792 307 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 ARPC3O15145 178 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 NDUFS7O75251 213 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 IGHA1P01876 353 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 TFP02787 698 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 DBHP09172 617 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 FAM157BP0CG42 384 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 APEHP13798 732 aaKnown RBP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 CD53P19397 219 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 SLC2A5P22732 501 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 HTR1FP30939 366 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 LIPAP38571 399 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 CDKN1AP38936 164 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms