RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
CLK3-218ENST00000566926 FKBP7Q9Y680 259 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ATP23Q9Y6H3 246 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ARFGEF3Q5TH69 2177 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 OR6C68A6NDL8 312 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 FAM183AA6NL82 134 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 GLCEO94923 617 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 IGKV3-15P01624 115 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 TFAP2AP05549 437 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 HTR1AP08908 422 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 BMP4P12644 408 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 SPI1P17947 270 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 CDKN2AP42771 156 aaKnown RBP11.68□□□□□ -0.54
CLK3-218ENST00000566926 ZNF84P51523 738 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 CDH15P55291 814 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 MELKQ14680 651 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 KLHL12Q53G59 568 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 KCTD8Q6ZWB6 473 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 DTX2Q86UW9 622 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 CYB561A3Q8NBI2 242 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 RORBQ92753 470 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 LGALS12Q96DT0 336 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 ZNF837Q96EG3 531 aaPredicted RBP11.68□□□□□ -0.54
CLK3-218ENST00000566926 MRPL48Q96GC5 212 aaKnown RBP11.68□□□□□ -0.54
CLK3-218ENST00000566926 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 OR51V1Q9H2C8 321 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 ERVK-18Q9QC07 812 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 FBXL3Q9UKT7 428 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 ERGIC3Q9Y282 383 aa11.68□□□□□ -0.54
CLK3-218ENST00000566926 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
CLK3-218ENST00000566926 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 VSTM5A8MXK1 200 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 E7EQL1 145 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 OVOL3O00110 214 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 DHHO43323 396 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 UBL3O95164 117 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 FARS2O95363 451 aaKnown RBP11.67□□□□□ -0.54
CLK3-218ENST00000566926 IGLV1-44P01699 117 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 SOD3P08294 240 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 PGA4P0DJD7 388 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 PGA3P0DJD8 388 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 FOSL1P15407 271 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 APOBEC3AP31941 199 aaPredicted RBP11.67□□□□□ -0.54
CLK3-218ENST00000566926 ALDH3B2P48448 385 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 FABP6P51161 128 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 ATP5J2P56134 94 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 TUBA1BP68363 451 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 GLO1Q04760 184 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 ETFDHQ16134 617 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 GSG1Q2KHT4 349 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 Q5PR19 223 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 THEM4Q5T1C6 240 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 TUBA1AQ71U36 451 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 DPPA2Q7Z7J5 298 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 ZBTB46Q86UZ6 589 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 PROKR2Q8NFJ6 384 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 BBS1Q8NFJ9 593 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 OR4F15Q8NGB8 312 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 RBP7Q96R05 134 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 CNN2Q99439 309 aaKnown RBP11.67□□□□□ -0.54
CLK3-218ENST00000566926 TRAF4Q9BUZ4 470 aaPredicted RBP11.67□□□□□ -0.54
CLK3-218ENST00000566926 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 SYT4Q9H2B2 425 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 RPRD1BQ9NQG5 326 aaKnown RBP11.67□□□□□ -0.54
CLK3-218ENST00000566926 CBLN4Q9NTU7 201 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 ACANP16112 2415 aa11.67□□□□□ -0.54
CLK3-218ENST00000566926 TMEM129A0AVI4 362 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 CCDC182A6NF36 153 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 MYL12BO14950 172 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 TRMUO75648 421 aaKnown RBP11.66□□□□□ -0.54
CLK3-218ENST00000566926 IGHA1P01876 353 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 MT-ND2P03891 347 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 QDPRP09417 244 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 CD79AP11912 226 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 B4GALT1P15291 398 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 C21orf33P30042 268 aaPredicted RBP11.66□□□□□ -0.54
CLK3-218ENST00000566926 NAAAQ02083 359 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 HSF2Q03933 536 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 EMX1Q04741 257 aaPredicted RBP11.66□□□□□ -0.54
CLK3-218ENST00000566926 SPOCK1Q08629 439 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 IRF3Q14653 427 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 UBE2UQ5VVX9 321 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 LRFN4Q6PJG9 635 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 ZNF367Q7RTV3 350 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 BCDIN3DQ7Z5W3 292 aaKnown RBP11.66□□□□□ -0.54
CLK3-218ENST00000566926 GPR141Q7Z602 305 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 MUC15Q8N387 334 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 ACBD7Q8N6N7 88 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 WFDC11Q8NEX6 87 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 NOXO1Q8NFA2 376 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 OR52I1Q8NGK6 324 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 HCAR1Q9BXC0 346 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 MRPL13Q9BYD1 178 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms