RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TMCC2O75069 709 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 NPIPB7O75200 414 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 IL1AP01583 271 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ITGA5P08648 1049 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 SBK2P0C263 348 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 GALP22466 123 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 FGF9P31371 208 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 RPL4P36578 427 aaKnown RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 PTH2RP49190 550 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 RPS7P62081 194 aaKnown RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 EGR4Q05215 589 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 LGALS3BPQ08380 585 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 GALEQ14376 348 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 GGTLC2Q14390 218 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF672Q499Z4 452 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 KLHL12Q53G59 568 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 SLC35D3Q5M8T2 416 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 TSPO2Q5TGU0 170 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 C5orf46Q6UWT4 87 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 SEZ6L2Q6UXD5 910 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 TMEM108Q6UXF1 575 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ABHD12BQ7Z5M8 362 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 OR52E2Q8NGJ4 325 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 MFSD8Q8NHS3 518 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 SPRYD4Q8WW59 207 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 TMEM45BQ96B21 275 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 C18orf12Q96KH6 178 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF385AQ96PM9 386 aaKnown RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 DDOQ99489 341 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ALG8Q9BVK2 526 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 GSX2Q9BZM3 304 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 OR51V1Q9H2C8 321 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 SLCO5A1Q9H2Y9 848 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 FKRPQ9H9S5 495 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ADGRL4Q9HBW9 690 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 NANSQ9NR45 359 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 DLL4Q9NR61 685 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 TXNL4BQ9NX01 149 aaKnown RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 CRNNQ9UBG3 495 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF229Q9UJW7 825 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 RASD1Q9Y272 281 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 IER3IP1Q9Y5U9 82 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-214ENST00000554604 TRAV36DV7A0A075B6V5 113 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 A0A1W2PR80 420 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 LRRN3E7EW58 273 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 ABCD4O14678 606 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 OR2T1O43869 369 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 TXNDC12O95881 172 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 MT-ATP6P00846 226 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 CD14P08571 375 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 CALRP27797 417 aaKnown RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 MPGP29372 298 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 CD40LGP29965 261 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 S100A5P33763 92 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF83P51522 516 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 FOXG1P55316 489 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 ATP5J2P56134 94 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 RPS25P62851 125 aaKnown RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 LTBQ06643 244 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 GABRA6Q16445 453 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 FAM69AQ5T7M9 428 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 KLHL24Q6TFL4 600 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 PRSS57Q6UWY2 283 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 KRTAP1-3Q8IUG1 177 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 PIAS4Q8N2W9 510 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 CYB561A3Q8NBI2 242 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 OR4K13Q8NH42 304 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 LILRB1Q8NHL6 650 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 SMAP2Q8WU79 429 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 NEUROG1Q92886 237 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 TRMT61AQ96FX7 289 aaKnown RBP10.87□□□□□ -0.67
SHMT2-214ENST00000554604 RADILQ96JH8 1075 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 Q96MF0 132 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 NMNAT2Q9BZQ4 307 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 FAIMQ9NVQ4 179 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 NPAP1Q9NZP6 1156 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 POU2F3Q9UKI9 436 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 GSTK1Q9Y2Q3 226 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
SHMT2-214ENST00000554604 OR6C65A6NJZ3 312 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 M0R1B8 84 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 LALBAP00709 142 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 BGLAPP02818 100 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF43P17038 809 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 PTAFRP25105 342 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 RPS19P39019 145 aaKnown RBP10.86□□□□□ -0.67
SHMT2-214ENST00000554604 ETV6P41212 452 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 RORCP51449 518 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 P2RY4P51582 365 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 SLC25A1P53007 311 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 PPP5CP53041 499 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 TAS2R43P59537 309 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms