RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 FBN3Q75N90 2809 aa0.7□□□□□ -2.3
TGFBR1-210ENST00000552573 SEC16AO15027 2179 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 A0A1W2PPE3 182 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 HEATR9A2RTY3 570 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 XKRY2A2RUG3 117 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 C5orf63A6NC05 138 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ZNF98A6NK75 572 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 PCP4L1A6NKN8 68 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 OR52A4PA6NMU1 304 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SNTNA6NMZ2 147 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 F6UB75 175 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 GOLGA8SH3BPF8 625 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 PSTPIP1O43586 416 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 DEDDO75618 318 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CLIC3O95833 236 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 TSPAN12O95859 305 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 FGGP02679 453 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 DBTP11182 482 aaKnown RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SSTR5P35346 364 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 EPS15P42566 896 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SLC1A2P43004 574 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SYKP43405 635 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ATP5OP48047 213 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CEBPDP49716 269 aaPredicted RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 RPS11P62280 158 aaKnown RBP eCLIP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 RBX1P62877 108 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CCNA1P78396 465 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 GBE1Q04446 702 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 TCP10Q12799 353 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 MRPL28Q13084 256 aaKnown RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ILKQ13418 452 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 FAM53BQ14153 422 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ZNF235Q14590 738 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ORMDL2Q53FV1 153 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 RNASE13Q5GAN3 156 aaKnown RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 PPM1LQ5SGD2 360 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 C1orf185Q5T7R7 199 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 METTL21CQ5VZV1 264 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 LRRC74BQ6ZQY2 392 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 LINC00336Q6ZUF6 198 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 NANOGNBQ7Z5D8 188 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 OAFQ86UD1 273 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 PSTKQ8IV42 348 aaKnown RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 NECAB1Q8N987 351 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 BBOF1Q8ND07 529 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 FAM83FQ8NEG4 500 aaPredicted RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 OR9K2Q8NGE7 335 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 OR56B2PQ8NGI1 322 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 OR5M1Q8NGP8 315 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 KCNG3Q8TAE7 436 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 FAM81AQ8TBF8 368 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SLC7A13Q8TCU3 470 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 AGR3Q8TD06 166 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 KLF14Q8TD94 323 aaPredicted RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 NT5C3BQ969T7 300 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 DYNLL2Q96FJ2 89 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SLC41A3Q96GZ6 507 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 TIMM17AQ99595 171 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SLC29A1Q99808 456 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 BPIFA3Q9BQP9 254 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CCDC77Q9BR77 488 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 LZTS2Q9BRK4 669 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SHANK2-AS3Q9BTD1 123 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CWH43Q9H720 699 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 VPS37BQ9H9H4 285 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 SLC38A10Q9HBR0 1119 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 RETNQ9HD89 108 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 KCNJ16Q9NPI9 418 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 AGPAT4Q9NRZ5 378 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 GCNT4Q9P109 453 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 PSMC3IPQ9P2W1 217 aaPredicted RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ZNF639Q9UID6 485 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 ST3GAL6Q9Y274 331 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CSDC2Q9Y534 153 aaKnown RBP0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 N6AMT1Q9Y5N5 214 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 NPTNQ9Y639 398 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 CNTNAP1P78357 1384 aa0.69□□□□□ -2.3
TGFBR1-210ENST00000552573 MUC6Q6W4X9 2439 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 TTC41PQ6P2S7 1318 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 PHLPP2Q6ZVD8 1323 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 CENPVL3A0A0U1RRI6 287 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 SERTM2A0A1B0GWG4 89 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 TMEM120BA0PK00 339 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 SMCO3A2RU48 225 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 NCF1BA6NI72 391 aaPredicted RBP0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 NCF1CA8MVU1 366 aaPredicted RBP0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 SUPT3HB4E1H0 165 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 ZNF878C9JN71 531 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 DNALI1O14645 258 aaPredicted RBP0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 RAB29O14966 203 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 RDH16O75452 317 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 REM1O75628 298 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 OR2J3O76001 311 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 ERLIN2O94905 339 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 TMEM50AO95807 157 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 TSPAN13O95857 204 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 CST1P01037 141 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 IGLV3-25P01717 112 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 HLA-DQB1P01920 261 aa0.68□□□□□ -2.3
TGFBR1-210ENST00000552573 ACSM4P0C7M7 580 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms