RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 DNAJC24Q6P3W2 148 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 PLET1Q6UQ28 207 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 WDFY1Q8IWB7 410 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 SDR9C7Q8NEX9 313 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 OR1S2Q8NGQ3 325 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 DCPSQ96C86 337 aaKnown RBP1.59□□□□□ -2.15
CCDC38-204ENST00000546816 TUBGCP3Q96CW5 907 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 DNAJC1Q96KC8 554 aaKnown RBP1.59□□□□□ -2.15
CCDC38-204ENST00000546816 PKNOX2Q96KN3 472 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 RSG1Q9BU20 258 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 GCOM2Q9BZD3 368 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-204ENST00000546816 SUN2Q9UH99 717 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 SLC7A8Q9UHI5 535 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 TRMT112Q9UI30 125 aaKnown RBP1.59□□□□□ -2.15
CCDC38-204ENST00000546816 MMACHCQ9Y4U1 282 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 MYO16Q9Y6X6 1858 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 GLYATL1P3A0A0U1RQE8 302 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 ARHGEF35A5YM69 484 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 LGALS9O00182 355 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 SEMA3DO95025 777 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 GPX4P36969 197 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 TAGLN2P37802 199 aaKnown RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 TNNT2P45379 298 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 HCAR3P49019 387 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 P2RX1P51575 399 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 TPMTP51580 245 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 ACTG2P63267 376 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 SLC25A11Q02978 314 aaKnown RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 DDX39BQ13838 428 aaKnown RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 TCEAL5Q5H9L2 206 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 ANKRD26P1Q6NSI1 321 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 CIRBP-AS1Q8TBR5 109 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 KLF14Q8TD94 323 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 SHC3Q92529 594 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 TCEAL3Q969E4 200 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF488Q96MN9 340 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 HSD17B10Q99714 261 aaKnown RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 KCNJ16Q9NPI9 418 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 SAMSN1Q9NSI8 373 aaKnown RBP1.58□□□□□ -2.16
CCDC38-204ENST00000546816 ST3GAL6Q9Y274 331 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 SCN4AP35499 1836 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 CNTNAP1P78357 1384 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 CAMTA1Q9Y6Y1 1673 aa1.58□□□□□ -2.16
CCDC38-204ENST00000546816 IGHV7-4-1A0A0J9YVY3 117 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF98A6NK75 572 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 CHMP2AO43633 222 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 CLPXO76031 633 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 SLC22A5O76082 557 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 SERPINA3P01011 423 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 CST1P01037 141 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 OR8U9P0C7N5 309 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 SLC2A3P11169 496 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF43P17038 809 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 ME2P23368 584 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 PSMB5P28074 263 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 CEACAM3P40198 252 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 CDH6P55285 790 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 FUT5Q11128 374 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 OR7A5Q15622 319 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 VPS26BQ4G0F5 336 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 MPV17L2Q567V2 206 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 PRAMEF5Q5TYX0 476 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 UBE2UQ5VVX9 321 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 PRAMEF6Q5VXH4 476 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 CASP12Q6UXS9 341 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM150AQ86TG1 271 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 NBPF5PQ86XG9 351 aaPredicted RBP1.57□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM105Q8N8V8 129 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 TVP23CQ96ET8 276 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 NEK6Q9HC98 313 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 PALLDQ8WX93 1383 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 USP47Q96K76 1375 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 SEC16AO15027 2179 aa1.57□□□□□ -2.16
CCDC38-204ENST00000546816 DENND4AQ7Z401 1863 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 SYNJ2BP-COX16A0A087WUM0 186 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 LRRIQ3A6PVS8 624 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 LYRM9A8MSI8 78 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 KLHL41O60662 606 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 PALMO75781 387 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 CRYGBP07316 175 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 NCF2P19878 526 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 CALRP27797 417 aaKnown RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 ACTR3P61158 418 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 PRR3P79522 188 aaKnown RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 RNASE13Q5GAN3 156 aaKnown RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 Q6ZSR3 168 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 NT5DC3Q86UY8 548 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 CDR2LQ86X02 465 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 UBE2J2Q8N2K1 259 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM256Q8N2U0 113 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 SLC35G3Q8N808 338 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM104Q8NE00 496 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 FBXL13Q8NEE6 735 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 C1orf64Q8NEQ6 169 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 B3GNT7Q8NFL0 401 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 OR9K2Q8NGE7 335 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 RAB3IL1Q8TBN0 382 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 FBXO32Q969P5 355 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 CHCHD7Q9BUK0 85 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 C1orf50Q9BV19 199 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms