RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MYOZ1Q9NP98 299 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-204ENST00000526430 HINT3Q9NQE9 182 aaKnown RBP9.41□□□□□ -0.9
NEDD8-204ENST00000526430 MRPL22Q9NWU5 206 aaKnown RBP9.41□□□□□ -0.9
NEDD8-204ENST00000526430 COA3Q9Y2R0 106 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-204ENST00000526430 ARPC4-TTLL3A0A0A6YYG9 625 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 LOC390937A0A1W2PQ73 354 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 FAM183AA6NL82 134 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 E7EQL1 145 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 M0R129 80 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 KRT33AO76009 404 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 ATP6V1G2O95670 118 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 MMP7P09237 267 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-204ENST00000526430 GAAP10253 952 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 B4GALT1P15291 398 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 GABRB1P18505 474 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 PYCR1P32322 319 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 CD47Q08722 323 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 TRIP10Q15642 601 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 NRN1LQ496H8 165 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 FAM27BQ5VT28 67 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 OR7E24Q6IFN5 339 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 LYPD4Q6UWN0 246 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 HDDC2Q7Z4H3 204 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 PEG10Q86TG7 708 aaKnown RBP9.4□□□□□ -0.9
NEDD8-204ENST00000526430 MYPOPQ86VE0 399 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-204ENST00000526430 SLC22A24Q8N4F4 322 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 BBS1Q8NFJ9 593 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 OR52L1Q8NGH7 329 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 OR52N5Q8NH56 324 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 FNDC8Q8TC99 324 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 EME1Q96AY2 570 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 FBXO17Q96EF6 278 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 SH3GL3Q99963 347 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 RPRD1BQ9NQG5 326 aaKnown RBP9.4□□□□□ -0.9
NEDD8-204ENST00000526430 POLE4Q9NR33 117 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 FAM118AQ9NWS6 357 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 TVP23BQ9NYZ1 205 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 CRNNQ9UBG3 495 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-204ENST00000526430 AASSQ9UDR5 926 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 NDRG4Q9ULP0 352 aaKnown RBP9.4□□□□□ -0.9
NEDD8-204ENST00000526430 PCDHGB1Q9Y5G3 927 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 FKBP7Q9Y680 259 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 RYR3Q15413 4870 aa9.4□□□□□ -0.9
NEDD8-204ENST00000526430 CIB4A0PJX0 185 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 XKRYO14609 159 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 SLC16A6O15403 523 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 KHDRBS3O75525 346 aaKnown RBP9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ALX3O95076 343 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 HMGN1P05114 100 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 GYPBP06028 91 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-204ENST00000526430 LAP3P28838 519 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 SLC25A1P53007 311 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 SH3BGRP55822 239 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ADARB1P78563 741 aaKnown RBP9.39□□□□□ -0.91
NEDD8-204ENST00000526430 MEP1BQ16820 701 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 AADACL4Q5VUY2 407 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF544Q6NX49 715 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF813Q6ZN06 617 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ABHD12BQ7Z5M8 362 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-204ENST00000526430 P2RY8Q86VZ1 359 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF584Q8IVC4 421 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 CPOQ8IVL8 374 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 GALNT4Q8N4A0 578 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 C17orf78Q8N4C9 275 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 PACRGLQ8N7B6 248 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 ZNF540Q8NDQ6 660 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 SLC26A10Q8NG04 563 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 OR51L1Q8NGJ5 315 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 OR9Q1Q8NGQ5 310 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 HPS1Q92902 700 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 JMJD8Q96S16 334 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 PITX2Q99697 317 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 C1QTNF6Q9BXI9 259 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 RACGAP1Q9H0H5 632 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 RIBC2Q9H4K1 309 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 METTL17Q9H7H0 456 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-204ENST00000526430 SIAEQ9HAT2 523 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 KLHL21Q9UJP4 597 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 WNK2Q9Y3S1 2297 aa9.39□□□□□ -0.91
NEDD8-204ENST00000526430 CCDC182A6NF36 153 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 LY6HO94772 140 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 IGKV3-15P01624 115 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 IGLV1-44P01699 117 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 HLA-HP01893 362 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 CELA3BP08861 270 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 OR8G3PP0DMU2 310 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 SPI1P17947 270 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 GGT2P36268 569 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 DVL1P1P54792 670 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-204ENST00000526430 HIST1H3AP68431 136 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 TGFBR3Q03167 851 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 PPA1Q15181 289 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-204ENST00000526430 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
NEDD8-204ENST00000526430 LAIR2Q6ISS4 152 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms