RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 A0A1W2PQD3 144 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 STK17BO94768 372 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 KCNK2O95069 426 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CCL4P13236 92 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 GABRA3P34903 492 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 GPR143P51810 404 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 MLF1P58340 268 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SORDQ00796 357 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF45Q02386 682 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SPOCK1Q08629 439 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 GANABQ14697 944 aaKnown RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 EXOSC7Q15024 291 aaKnown RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 TMEM44Q2T9K0 475 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SYT6Q5T7P8 510 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 HES5Q5TA89 166 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 HES3Q5TGS1 186 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 Q6ZPB1 254 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 DGAT2L6Q6ZPD8 337 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 COLCA1Q6ZS62 124 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SLC16A12Q6ZSM3 486 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 PRSS48Q7RTY5 328 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SLC34A3Q8N130 599 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SLC38A9Q8NBW4 561 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 NFAM1Q8NET5 270 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 OR9Q2Q8NGE9 314 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 OR5D16Q8NGK9 328 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 OR52P1PQ8NH57 321 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 C16orf52Q8NHV5 167 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 PHF10Q8WUB8 498 aaKnown RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ABTB1Q969K4 478 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 NXPE2Q96DL1 559 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 COL21A1Q96P44 957 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 OR14A2Q96R54 314 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 OR51V1Q9H2C8 321 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RGCCQ9H4X1 137 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 APMAPQ9HDC9 416 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RDH8Q9NYR8 311 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 DIMT1Q9UNQ2 313 aaKnown RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RNF6Q9Y252 685 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SLC35A3Q9Y2D2 325 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CXorf65A6NEN9 183 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CD8B2A6NJW9 211 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 NPIPB9F8W1W9 429 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 FFAR1O14842 300 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF264O43296 627 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 BCAS1O75363 584 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 SERPINI2O75830 405 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CCNKO75909 580 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 KDM4BO94953 1096 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 MAP2K4P45985 399 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PRPS1P60891 318 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RPS15P62841 145 aaKnown RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 KCNMB1Q16558 191 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CTF1Q16619 201 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PYHIN1Q6K0P9 492 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CROCCP3Q8IVE0 287 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PARP8Q8N3A8 854 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF441Q8N8Z8 693 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 GPR32P1Q8NGA4 272 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RHOXF1Q8NHV9 184 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 TSLPQ969D9 159 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RHNO1Q9BSD3 238 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PAPOLGQ9BWT3 736 aaKnown RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RSPO3Q9BXY4 272 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PLGRKTQ9HBL7 147 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ACOT13Q9NPJ3 140 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 EQTNQ9NQ60 294 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 EXOSC3Q9NQT5 275 aaKnown RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 YAE1D1Q9NRH1 226 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF443Q9Y2A4 671 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 KNL1Q8NG31 2342 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 TRABD2BA6NFA1 517 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 FAAHO00519 579 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF208O43345 1280 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZFAND5O76080 213 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 APOA1P02647 267 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 FCER2P06734 321 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CT45A8P0DMV1 189 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CT45A9P0DMV2 189 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CBLP22681 906 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 MMP11P24347 488 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 GABRA5P31644 462 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 GSSP48637 474 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 IL18Q14116 193 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 EBPQ15125 230 aaKnown RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 C2orf68Q2NKX9 166 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CT45A2Q5DJT8 189 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RNASE12Q5GAN4 147 aaKnown RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ACER2Q5QJU3 275 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PRAMEF17Q5VTA0 474 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 TCTN3Q6NUS6 607 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF550Q7Z398 422 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RANBP3LQ86VV4 465 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RAB43Q86YS6 212 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 OR5D18Q8NGL1 313 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF775Q96BV0 537 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PRRC1Q96M27 445 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 TECTBQ96PL2 329 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms