RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 UPK3AO75631 287 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 CLUP10909 449 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 CTLA4P16410 223 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 GABRB1P18505 474 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 PCSK6P29122 969 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 GUCA1AP43080 201 aaPredicted RBP10.61□□□□□ -0.71
UPF3A-210ENST00000493727 OR3A2P47893 321 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 TEKQ02763 1124 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 ANKRD39Q53RE8 183 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF362Q5T0B9 420 aaPredicted RBP10.61□□□□□ -0.71
UPF3A-210ENST00000493727 TSPO2Q5TGU0 170 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 AADACL4Q5VUY2 407 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 APH1BQ8WW43 257 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 ZC3HAV1LQ96H79 300 aaKnown RBP10.61□□□□□ -0.71
UPF3A-210ENST00000493727 HCAR1Q9BXC0 346 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 LINC00470Q9BZP3 86 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 RACGAP1Q9H0H5 632 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 CRLF2Q9HC73 371 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 PRSS50Q9UI38 385 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 B9D1Q9UPM9 204 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 NBEAL1Q6ZS30 2694 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 DHHO43323 396 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 GLCEO94923 617 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 HTR1FP30939 366 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 ATP6V1E1P36543 226 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 BLVRAP53004 296 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 EFNB1P98172 346 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 ROR2Q01974 943 aaKnown RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 GLO1Q04760 184 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 EGR3Q06889 387 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 FAPQ12884 760 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 SMN1Q16637 294 aaKnown RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 SLC35D3Q5M8T2 416 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 PHYHD1Q5SRE7 291 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 SLC25A30Q5SVS4 291 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 FBXW9Q5XUX1 488 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 TFAP2EQ6VUC0 442 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 MEPCEQ7L2J0 689 aaKnown RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 OR6V1Q8N148 313 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 PTP4A1Q93096 173 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 ZMYND19Q96E35 227 aaPredicted RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 Q96MF0 132 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 DDOQ99489 341 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 NMNAT2Q9BZQ4 307 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 SEC61A2Q9H9S3 476 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 SLC7A10Q9NS82 523 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 SCN3BQ9NY72 215 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 PRR13Q9NZ81 148 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 WARS2Q9UGM6 360 aaKnown RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 BLOC1S6Q9UL45 172 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 MOKQ9UQ07 419 aa10.6□□□□□ -0.71
UPF3A-210ENST00000493727 COA3Q9Y2R0 106 aaPredicted RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 RPL36Q9Y3U8 105 aaKnown RBP10.6□□□□□ -0.71
UPF3A-210ENST00000493727 IGLV1-36A0A0B4J1U3 117 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 IGKV1D-43A0A0B4J1Z2 117 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 DCTN6O00399 190 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 WBP4O75554 376 aaKnown RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 CNOT4O95628 575 aaKnown RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 MRPL3P09001 348 aaKnown RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 PSMB1P20618 241 aaKnown RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 EDNRAP25101 427 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 LOXP28300 417 aaPredicted RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 MTNR1AP48039 350 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF91Q05481 1191 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 DBPQ10586 325 aaPredicted RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 TMED1Q13445 227 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 ETFDHQ16134 617 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 HIST3H3Q16695 136 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 CEACAM16Q2WEN9 425 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 C10orf128Q5T292 105 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 C9orf135Q5VTT2 229 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 SLC25A47Q6Q0C1 308 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 STAC2Q6ZMT1 411 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 ZBTB46Q86UZ6 589 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 GLB1L2Q8IW92 636 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 OR10H5Q8NGA6 315 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 TMEM171Q8WVE6 324 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 PERPQ96FX8 193 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 CNN2Q99439 309 aaKnown RBP10.59□□□□□ -0.71
UPF3A-210ENST00000493727 HDHD5Q9BXW7 423 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 CXorf56Q9H5V9 222 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 AMBNQ9NP70 447 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 GFOD1Q9NXC2 390 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 UBAP1Q9NZ09 502 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 MALT1Q9UDY8 824 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 POLR1DQ9Y2S0 133 aa10.59□□□□□ -0.71
UPF3A-210ENST00000493727 CADP27708 2225 aa10.58□□□□□ -0.72
UPF3A-210ENST00000493727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.58□□□□□ -0.72
UPF3A-210ENST00000493727 IRGMA1A4Y4 181 aa10.58□□□□□ -0.72
UPF3A-210ENST00000493727 CCDC182A6NF36 153 aa10.58□□□□□ -0.72
UPF3A-210ENST00000493727 TRIM64A6NGJ6 449 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms