RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PRKAB2O43741 272 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 OR7C2O60412 319 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 REM1O75628 298 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 TM7SF2O76062 418 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 SMC2O95347 1197 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 KRT8P05787 483 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 TROVE2P10155 538 aaKnown RBP eCLIP0.32□□□□□ -2.36
HPS3-205ENST00000478525 PAX7P23759 505 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 HMGB2P26583 209 aaKnown RBP0.32□□□□□ -2.36
HPS3-205ENST00000478525 MAPK3P27361 379 aaPredicted RBP0.32□□□□□ -2.36
HPS3-205ENST00000478525 PCK1P35558 622 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 ATP5C1P36542 298 aaKnown RBP0.32□□□□□ -2.36
HPS3-205ENST00000478525 ATP6V1E1P36543 226 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 TALDO1P37837 337 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 GRIA1P42261 906 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 RORCP51449 518 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 SSR4P51571 173 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 CCNG1P51959 295 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 CBX1P83916 185 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 PRB3Q04118 309 aaPredicted RBP0.32□□□□□ -2.36
HPS3-205ENST00000478525 KLRB1Q12918 225 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 EXOC3L2Q2M3D2 409 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 ZNF181Q2M3W8 571 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 SLC36A3Q495N2 470 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 MPV17L2Q567V2 206 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 XKR7Q5GH72 579 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 METTL21CQ5VZV1 264 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 AMMECR1LQ6DCA0 310 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 MED27Q6P2C8 311 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 PDIK1LQ8N165 341 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 SNX31Q8N9S9 440 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 UBAC2Q8NBM4 344 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 OR10R2Q8NGX6 335 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 OR4K13Q8NH42 304 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 TMEM54Q969K7 222 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 COPS8Q99627 209 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 RARRES2Q99969 163 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 TPPP3Q9BW30 176 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 PARD6BQ9BYG5 372 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 TOLLIPQ9H0E2 274 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 LRRN3Q9H3W5 708 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 RIBC2Q9H4K1 309 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 DUSP21Q9H596 190 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 ELOVL3Q9HB03 270 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 INIPQ9NRY2 104 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 MTCH1Q9NZJ7 389 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 DDX19BQ9UMR2 479 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 PIN4Q9Y237 131 aaKnown RBP0.32□□□□□ -2.36
HPS3-205ENST00000478525 GOLT1BQ9Y3E0 138 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 DYSFO75923 2080 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 MPDZO75970 2070 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 CDHR2Q9BYE9 1310 aa0.32□□□□□ -2.36
HPS3-205ENST00000478525 AK9Q5TCS8 1911 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 DOCK10Q96BY6 2186 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 LOC102724200A0A096LPH7 203 aaPredicted RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 A0A1B0GVL5 298 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 LYRM9A8MSI8 78 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 A8MWL6 223 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 H7C0C1 242 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 CDC7O00311 574 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 SLC31A1O15431 190 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ZNF208O43345 1280 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 CCDC22O60826 627 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 RAMP3O60896 148 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 EEDO75530 441 aaKnown RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 OR7A10O76100 309 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 AIFM1O95831 613 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 IGHV2-5P01817 119 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ANGP03950 147 aaKnown RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 MMP7P09237 267 aaPredicted RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 CD3GP09693 182 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 HSPD1P10809 573 aaKnown RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 CYP2F1P24903 491 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 LGALS7P47929 136 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ATP5OP48047 213 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 DUSP3P51452 185 aaPredicted RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 CDH6P55285 790 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 NUTF2P61970 127 aaKnown RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 CDK5Q00535 292 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ECH1Q13011 328 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 CUL2Q13617 745 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 RIPPLY2Q5TAB7 128 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 TTC23Q5W5X9 447 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 SPECC1LQ69YQ0 1117 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 TMPRSS11AQ6ZMR5 421 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ECHDC2Q86YB7 292 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 CPNE9Q8IYJ1 553 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 CSGALNACT2Q8N6G5 542 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ZFP41Q8N8Y5 198 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 OR2A1Q8NGT9 310 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 MAGEE2Q8TD90 523 aaPredicted RBP0.31□□□□□ -2.36
HPS3-205ENST00000478525 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.31□□□□□ -2.36
HPS3-205ENST00000478525 SERPINB12Q96P63 405 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 SLC2A8Q9NY64 477 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ZNF492Q9P255 531 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 IKZF2Q9UKS7 526 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 TIMM10BQ9Y5J6 103 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 PEX16Q9Y5Y5 336 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 CCDC88CQ9P219 2028 aa0.31□□□□□ -2.36
HPS3-205ENST00000478525 ATG2BQ96BY7 2078 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms