RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IGLV1-36A0A0B4J1U3 117 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 A0A1B0GTI1 187 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 KANTRA0A1W2PQU2 76 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 TMEM235A6NFC5 223 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 SLC25A12O75746 678 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 PLATP00750 562 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 HLA-AP01891 365 aaKnown RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 ROM1Q03395 351 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 FGL1Q08830 312 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 KCTD18Q6PI47 426 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 MAMDC2Q7Z304 686 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 ADGRE4PQ86SQ3 457 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 CD163Q86VB7 1156 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 KCNRGQ8N5I3 272 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF519Q8TB69 540 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 GPR119Q8TDV5 335 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 EDAQ92838 391 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 LRRC46Q96FV0 321 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF285Q96NJ3 590 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 BARX1Q9HBU1 254 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 CNTRLQ7Z7A1 2325 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 RORAP35398 523 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 FMODQ06828 376 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 LIN54Q6MZP7 749 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 NKD1Q969G9 470 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 VRK1Q99986 396 aaPredicted RBP18.92■□□□□ 0.62
COL18A1-207ENST00000473212 IFT46Q9NQC8 304 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 TNFSF18Q9UNG2 199 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 A0A1B0GW55 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 A0A1W2PPC4 97 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 H0YIG0 161 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DNASE2O00115 360 aaPredicted RBP18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4L2P0CJ85 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4L3P0CJ86 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4L4P0CJ87 422 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4L5P0CJ88 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4L6P0CJ89 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4L7P0CJ90 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 IL32P24001 234 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 IL12BP29460 328 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 LTBRP36941 435 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 SLC6A8P48029 635 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DNASE1L1P49184 302 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 C11orf87Q6NUJ2 197 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 ACBD4Q8NC06 268 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 OR13C3Q8NGS6 347 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 SLC46A1Q96NT5 459 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 PELOQ9BRX2 385 aaKnown RBP18.92■□□□□ 0.62
COL18A1-207ENST00000473212 EDEM2Q9BV94 578 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 DUX4Q9UBX2 424 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 VSIG4Q9Y279 399 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 EMC9Q9Y3B6 208 aa18.92■□□□□ 0.62
COL18A1-207ENST00000473212 RTTNQ86VV8 2226 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 MYF5P13349 255 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 EBPQ15125 230 aaKnown RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 CORO6Q6QEF8 472 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 MOB3CQ70IA8 216 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 LINC00346Q8IVM7 164 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 ZBTB8AQ96BR9 441 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF587Q96SQ5 575 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF471Q9BX82 626 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 CUTCQ9NTM9 273 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 COMMD9Q9P000 198 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 FRG2CA6NGY1 282 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 CD74P04233 296 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 SGCBQ16585 318 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 C1orf189Q5VU69 101 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 C3orf33Q6P1S2 294 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 PAPD4Q6PIY7 484 aaKnown RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 BOLLQ8N9W6 283 aaKnown RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 BPIFCQ8NFQ6 507 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 DUSP15Q9H1R2 295 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 SLCO5A1Q9H2Y9 848 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 PDE7BQ9NP56 450 aa18.91■□□□□ 0.62
COL18A1-207ENST00000473212 MYOZ1Q9NP98 299 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 COA3Q9Y2R0 106 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-207ENST00000473212 TMEM150CB9EJG8 249 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 WDPCPO95876 746 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 GALNSP34059 522 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 RTN4RL2Q86UN3 420 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF584Q8IVC4 421 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 PPP1R1CQ8WVI7 109 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 CYYR1Q96J86 154 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 TXNIPQ9H3M7 391 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 VSX1Q9NZR4 365 aaPredicted RBP18.9■□□□□ 0.62
COL18A1-207ENST00000473212 PLEKHA6Q9Y2H5 1048 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 IGHV3-20A0A0C4DH32 117 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 FAM74A7A6NL05 159 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 LDLRAD4O15165 306 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 BCL2L11O43521 198 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 FSTP19883 344 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 CAPZA1P52907 286 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 ATP1B3P54709 279 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 FAM74A3Q4VXF1 159 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 NARS2Q96I59 477 aaKnown RBP18.9■□□□□ 0.62
COL18A1-207ENST00000473212 DNTTIP1Q9H147 329 aa18.9■□□□□ 0.62
COL18A1-207ENST00000473212 CPAMD8Q8IZJ3 1885 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 IGKV1D-43A0A0B4J1Z2 117 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 FAM25EA8MYX2 175 aa18.89■□□□□ 0.61
COL18A1-207ENST00000473212 OR2F2O95006 317 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms