RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SLC25A15Q9Y619 301 aa15.17■□□□□ 0.02
CPSF4-209ENST00000465132 USF3Q68DE3 2245 aa15.17■□□□□ 0.02
CPSF4-209ENST00000465132 ZANQ9Y493 2812 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 IGKV1D-43A0A0B4J1Z2 117 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 DCTN6O00399 190 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 PHYHO14832 338 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 SEC14L2O76054 403 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 GYPBP06028 91 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 GAAP10253 952 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 FOXG1P55316 489 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-209ENST00000465132 KRTAP1-1Q07627 177 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 ECH1Q13011 328 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 TSC22D1Q15714 1073 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 ALKBH2Q6NS38 261 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 THAP5Q7Z6K1 395 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 SKA3Q8IX90 412 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 ENTHD1Q8IYW4 607 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 LILRB1Q8NHL6 650 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-209ENST00000465132 C11orf40Q8WZ69 217 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 MRPL48Q96GC5 212 aaKnown RBP15.16■□□□□ 0.02
CPSF4-209ENST00000465132 RADILQ96JH8 1075 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 CNN2Q99439 309 aaKnown RBP15.16■□□□□ 0.02
CPSF4-209ENST00000465132 SH3GL3Q99963 347 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 ZNF416Q9BWM5 594 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 MED20Q9H944 212 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 MARCH7Q9H992 704 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 ATPIF1Q9UII2 106 aa15.16■□□□□ 0.02
CPSF4-209ENST00000465132 SLC2A5P22732 501 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 PTAFRP25105 342 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 GGTLC2Q14390 218 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 KLHL22Q53GT1 634 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 ARL9Q6T311 187 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 SLC16A9Q7RTY1 509 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 ERI1Q8IV48 349 aaKnown RBP15.15■□□□□ 0.02
CPSF4-209ENST00000465132 WDR31Q8NA23 367 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 OR51L1Q8NGJ5 315 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 ZNF582Q96NG8 517 aaPredicted RBP15.15■□□□□ 0.02
CPSF4-209ENST00000465132 ANKRD60Q9BZ19 345 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 RNF115Q9Y4L5 304 aa15.15■□□□□ 0.02
CPSF4-209ENST00000465132 OVOL3O00110 214 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF593O00488 134 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-209ENST00000465132 HLA-HP01893 362 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 TFP02787 698 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 SERPINA5P05154 406 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 COX5BP10606 129 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 MTNR1AP48039 350 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 NUDT6P53370 316 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 ACTC1P68032 377 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 ACTA1P68133 377 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 MED21Q13503 144 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 MAD2L1BPQ15013 274 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-209ENST00000465132 CLEC12BQ2HXU8 276 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 NCMAPQ5T1S8 102 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 C6orf52Q5T4I8 152 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 KRT80Q6KB66 452 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 KCTD18Q6PI47 426 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-209ENST00000465132 RHOUQ7L0Q8 258 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 HCAR1Q9BXC0 346 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 HDHD2Q9H0R4 259 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 WDR76Q9H967 626 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 EMC7Q9NPA0 242 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 B3GNT2Q9NY97 397 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 CRNNQ9UBG3 495 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-209ENST00000465132 ASH2LQ9UBL3 628 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 CYB5R1Q9UHQ9 305 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 SPEF1Q9Y4P9 236 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 COMMD3-BMI1R4GMX3 469 aa15.14■□□□□ 0.01
CPSF4-209ENST00000465132 SGCEO43556 437 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ENTPD6O75354 484 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 CRLF1O75462 422 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 FADS2O95864 444 aaKnown RBP15.13■□□□□ 0.01
CPSF4-209ENST00000465132 IGKV3-15P01624 115 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 CRYAAP02489 173 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 APOC1P02654 83 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 CD3EP07766 207 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 SOD3P08294 240 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 SPARCP09486 303 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 DANCRP0C864 163 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 CLUP10909 449 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 APLNRP35414 380 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 SLC15A1P46059 708 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ISL1P61371 349 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 PIGFQ07326 219 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ENDOGQ14249 297 aaKnown RBP15.13■□□□□ 0.01
CPSF4-209ENST00000465132 PCK2Q16822 640 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 TBC1D28Q2M2D7 210 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 LINC01590Q5TEZ4 76 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 SLC18B1Q6NT16 456 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 USP51Q70EK9 711 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-209ENST00000465132 MDP1Q86V88 176 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 C1orf174Q8IYL3 243 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ZNF511Q8NB15 262 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 BBS1Q8NFJ9 593 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 OR6N2Q8NGY6 317 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ASB17Q8WXJ9 295 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 FBXW5Q969U6 566 aa15.13■□□□□ 0.01
CPSF4-209ENST00000465132 ZMYND19Q96E35 227 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-209ENST00000465132 TRMT61AQ96FX7 289 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms