RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 CX3CR1P49238 355 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 CCR9P51686 369 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 CAPZA1P52907 286 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 CASP6P55212 293 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 LSM6P62312 80 aaKnown RBP3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 MRPS34P82930 218 aaKnown RBP3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 PITPNAQ00169 270 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 RBPJQ06330 500 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 FOXO1Q12778 655 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 MALLQ13021 153 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 RNASE12Q5GAN4 147 aaKnown RBP3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 WDR38Q5JTN6 314 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 CNIH2Q6PI25 160 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 SLC25A47Q6Q0C1 308 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 RDH10Q8IZV5 341 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 MDS2Q8NDY4 140 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 OR5M9Q8NGP3 310 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 CPT1CQ8TCG5 803 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 C15orf40Q8WUR7 153 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNRF4Q8WWF5 429 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 S100A16Q96FQ6 103 aaKnown RBP3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 HIST1H2AAQ96QV6 131 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 GAL3ST1Q99999 423 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 ZNF416Q9BWM5 594 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 PROK2Q9HC23 129 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 ACKR4Q9NPB9 350 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 MRPL22Q9NWU5 206 aaKnown RBP3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 ZMIZ1Q9ULJ6 1067 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 TIMM10BQ9Y5J6 103 aa3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 SIRT4Q9Y6E7 314 aaPredicted RBP3.65□□□□□ -1.82
ATP13A3-206ENST00000461660 OR4C45A6NMZ5 311 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 M0R135 149 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 TERTO14746 1132 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 CYTIPO60759 359 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 WISP1O95388 367 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 YES1P07947 543 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ITGA5P08648 1049 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ADRA2AP08913 450 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 SLC2A2P11168 524 aaPredicted RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 APLNRP35414 380 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ARF1P84077 181 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ROM1Q03395 351 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ELFN2Q5R3F8 820 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 RSBN1Q5VWQ0 802 aaPredicted RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 OR2A2Q6IF42 318 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 LINGO2Q7L985 606 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 KRT74Q7RTS7 529 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 LAX1Q8IWV1 398 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ZNF101Q8IZC7 436 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 OR5D14Q8NGL3 314 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 RNF133Q8WVZ7 376 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 HSD17B8Q92506 261 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ZNF799Q96GE5 643 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 CCDC32Q9BV29 185 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 CDH20Q9HBT6 801 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ST6GALNAC2Q9UJ37 374 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ZNF175Q9Y473 711 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 KCNMB2Q9Y691 235 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 COL5A1P20908 1838 aaPredicted RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 TNRC6BQ9UPQ9 1833 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 REV3LO60673 3130 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 A0A096LPE4 126 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 TRAV1-2A0A0B4J238 106 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 A0A1B0GTH9 108 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 A0A1W2PPZ6 126 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 METTL21EPA6NDL7 271 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 PRRG2O14669 202 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 HPGDSO60760 199 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 UPK3AO75631 287 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 SNRPBP14678 240 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 SRMP19623 302 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 KLK2P20151 261 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 RAB3AP20336 220 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 PTGS2P35354 604 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ART1P52961 327 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 SUCLG1P53597 346 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ZNF121P58317 390 aaPredicted RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 MRPS15P82914 257 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 SPOCK1Q08629 439 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 INSL4Q14641 139 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 RAB35Q15286 201 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 FAM189A2Q15884 450 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 TEX30Q5JUR7 227 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 RIPPLY2Q5TAB7 128 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 XKRXQ6PP77 449 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 BAIAP2L2Q6UXY1 529 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 ASB18Q6ZVZ8 466 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 MRPL21Q7Z2W9 205 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 LRRC28Q86X40 367 aaPredicted RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 SNX29P2Q8IUI4 249 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 TUSC5Q8IXB3 177 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 C20orf196Q8IYI0 205 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 GCNT2Q8N0V5 402 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 FTMTQ8N4E7 242 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 GDPD1Q8N9F7 314 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 CHST4Q8NCG5 386 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 OR13C9Q8NGT0 318 aa3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 TRMT61AQ96FX7 289 aaKnown RBP3.65□□□□□ -1.83
ATP13A3-206ENST00000461660 AMELYQ99218 206 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms