RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 WFIKKN1Q96NZ8 548 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 HDHD3Q9BSH5 251 aaPredicted RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 OSBPL10Q9BXB5 764 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 GABARAPL3Q9BY60 117 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 RACGAP1Q9H0H5 632 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 NEUROG2Q9H2A3 272 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 CWH43Q9H720 699 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 NMRK1Q9NWW6 199 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 PSMC3IPQ9P2W1 217 aaPredicted RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 PCYOX1Q9UHG3 505 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 CTNNA3Q9UI47 895 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 RABL2BQ9UNT1 228 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ITGB4P16144 1822 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 SPTBN2O15020 2390 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 SCN2AQ99250 2005 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ZNF831Q5JPB2 1677 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 HELZ2Q9BYK8 2649 aaKnown RBP2.1□□□□□ -2.07
RFC4-211ENST00000460408 RIC1Q4ADV7 1423 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 NACAE9PAV3 2078 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 COL4A5P29400 1685 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 MYO9AB2RTY4 2548 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 WDFY4Q6ZS81 3184 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 GOLGA8OA6NCC3 632 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 TRIM64CA6NLI5 447 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 GOLGA8NF8WBI6 632 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 ERLIN2O94905 339 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 SLC25A27O95847 323 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 CNR1P21554 472 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 OMGP23515 440 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 HOXA9P31269 272 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 RORCP51449 518 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 MRPS22P82650 360 aaKnown RBP2.1□□□□□ -2.07
RFC4-211ENST00000460408 SHHQ15465 462 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 TGFBIQ15582 683 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 CCDC183Q5T5S1 534 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 ZNF836Q6ZNA1 936 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 H2AFVQ71UI9 128 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 PEX26Q7Z412 305 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 DUSP18Q8NEJ0 188 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 OR56B2PQ8NGI1 322 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 GPR151Q8TDV0 419 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 PIBF1Q8WXW3 757 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 STMN2Q93045 179 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 DNAJC19Q96DA6 116 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 TAAR1Q96RJ0 339 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 MYCBPQ99417 103 aaPredicted RBP2.1□□□□□ -2.07
RFC4-211ENST00000460408 SH3GL3Q99963 347 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 GPR61Q9BZJ8 451 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 ILKAPQ9H0C8 392 aaPredicted RBP2.1□□□□□ -2.07
RFC4-211ENST00000460408 TM9SF3Q9HD45 589 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 NUP50Q9UKX7 468 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 LRRC37A2A6NM11 1700 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 COL5A3P25940 1745 aaPredicted RBP2.1□□□□□ -2.07
RFC4-211ENST00000460408 ARHGAP21Q5T5U3 1957 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 SPTA1P02549 2419 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 NFASCO94856 1347 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 REV3LO60673 3130 aa2.1□□□□□ -2.07
RFC4-211ENST00000460408 COL1A1P02452 1464 aaPredicted RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 SPTAN1Q13813 2472 aaKnown RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 DCHS1Q96JQ0 3298 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 TRAV39A0A0B4J263 110 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 HEATR9A2RTY3 570 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 PRSS37A4D1T9 235 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 FAM47DPA6NHR8 397 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 C11orf94C9JXX5 98 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SPECC1L-ADORA2AF8WAN1 911 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 XKRYO14609 159 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 MRPS12O15235 138 aaKnown RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 SNAI2O43623 268 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 UTS2O95399 124 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 FGGP02679 453 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 PRB2P02812 416 aaPredicted RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 CHMLP26374 656 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SERPINB5P36952 375 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 AQP2P41181 271 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 NSG1P42857 185 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 PPOXP50336 477 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 CCNHP51946 323 aaPredicted RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 HMGCS1Q01581 520 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SMARCB1Q12824 385 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 TTLL9Q3SXZ7 439 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 ZBED5Q49AG3 693 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 TSPO2Q5TGU0 170 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SPECC1LQ69YQ0 1117 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 PDIK1LQ8N165 341 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 CEP112Q8N8E3 955 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 FBXL13Q8NEE6 735 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 CCDC54Q8NEL0 328 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SPATA4Q8NEY3 305 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 ZNF596Q8TC21 504 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 GEMIN6Q8WXD5 167 aaKnown RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 TSSK3Q96PN8 268 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SDHCQ99643 169 aaPredicted RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 CCDC77Q9BR77 488 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 NUP58Q9BVL2 599 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 SLC17A9Q9BYT1 436 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 MRPL37Q9BZE1 423 aaKnown RBP2.09□□□□□ -2.07
RFC4-211ENST00000460408 TPK1Q9H3S4 243 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 MYOZ2Q9NPC6 264 aa2.09□□□□□ -2.07
RFC4-211ENST00000460408 LSM7Q9UK45 103 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms