RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 TIMD4Q96H15 378 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 SMIM10Q96HG1 83 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 CAMK2N2Q96S95 79 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 NUDT9Q9BW91 350 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 CACNG6Q9BXT2 260 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 OSBPL8Q9BZF1 889 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 PARP12Q9H0J9 701 aaKnown RBP0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 FOLH1BQ9HBA9 442 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 RDH8Q9NYR8 311 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 CNIH4Q9P003 139 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 COPS3Q9UNS2 423 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 MYO3BQ8WXR4 1341 aa0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 ZNF638Q14966 1978 aaKnown RBP0.36□□□□□ -2.35
HMGN1P33-201ENST00000432945 TET2Q6N021 2002 aaPredicted RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 MDC1Q14676 2089 aaKnown RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 IGHV5-10-1A0A0J9YXX1 117 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 GSAPA4D1B5 854 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 LGALS8O00214 317 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 CDC7O00311 574 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PRKYO43930 277 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 LGI1O95970 557 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 BGLAPP02818 100 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 LDHCP07864 332 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 OR56A5P0C7T3 313 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 CALCRP30988 508 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PRKXP51817 358 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 HNRNPFP52597 415 aaKnown RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 NAPAP54920 295 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 KIAA1024LP59773 190 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 RPS11P62280 158 aaKnown RBP eCLIP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ESRRGP62508 458 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ASPHQ12797 758 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 IL15RAQ13261 267 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PDIA5Q14554 519 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PRPSAP1Q14558 356 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 KIAA0087Q14695 138 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 MORF4L2Q15014 288 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ZNHIT3Q15649 155 aaPredicted RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 TMEM249Q2WGJ8 235 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 HFEQ30201 348 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 KRTAP19-2Q3LHN2 52 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 FAM78AQ5JUQ0 283 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 SLC10A5Q5PT55 438 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 FAM199XQ6PEV8 388 aaPredicted RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 CASP12Q6UXS9 341 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 UNQ9165/PRO28630Q6UXU0 137 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 HSDL2Q6YN16 418 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 Q6ZN92 141 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PEX26Q7Z412 305 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 GALNTL5Q7Z4T8 443 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 NT5DC3Q86UY8 548 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 TPRA1Q86W33 373 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 TMEM17Q86X19 198 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 EFCAB13Q8IY85 973 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 LGI3Q8N145 548 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 OR8H3Q8N146 312 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 TMCO5AQ8N6Q1 288 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 SYT14Q8NB59 555 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 NECAP1Q8NC96 275 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 APCDD1LQ8NCL9 501 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ZNF680Q8NEM1 530 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 FIBINQ8TAL6 211 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PNPT1Q8TCS8 783 aaKnown RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ZNF418Q8TF45 676 aaPredicted RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 GIPC3Q8TF64 312 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 RNF139Q8WU17 664 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ESR2Q92731 530 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 RPL3LQ92901 407 aaKnown RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 NARS2Q96I59 477 aaKnown RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 NAT9Q9BTE0 207 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 SLC5A7Q9GZV3 580 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ATG10Q9H0Y0 220 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 DEFB127Q9H1M4 99 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 C20orf85Q9H1P6 137 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 SRMSQ9H3Y6 488 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 VCPKMTQ9H867 229 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 PARP11Q9NR21 331 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 CTPS2Q9NRF8 586 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 AGPAT4Q9NRZ5 378 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 EXD2Q9NVH0 621 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 DNAJB9Q9UBS3 223 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 XPO7Q9UIA9 1087 aaKnown RBP0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 AP4B1Q9Y6B7 739 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 SPEF2Q9C093 1822 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 FANCIQ9NVI1 1328 aa0.35□□□□□ -2.35
HMGN1P33-201ENST00000432945 ANKRD12Q6UB98 2062 aa0.34□□□□□ -2.35
HMGN1P33-201ENST00000432945 PLIN4Q96Q06 1357 aa0.34□□□□□ -2.35
HMGN1P33-201ENST00000432945 IGHV2-70DA0A0C4DH43 119 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 A0A1W2PPE3 182 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 ZNF320A2RRD8 509 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 A4D1N5 150 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 FAM74A7A6NL05 159 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 LRRC30A6NM36 301 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 ANKRD30BLA7E2S9 258 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 VGLL3A8MV65 326 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 KIF2AO00139 706 aaPredicted RBP0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 NVLO15381 856 aaKnown RBP0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 UGT1A9O60656 530 aa0.34□□□□□ -2.36
HMGN1P33-201ENST00000432945 DPM1O60762 260 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms