RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CD8B2A6NJW9 211 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 SS18L1O75177 396 aaPredicted RBP18.29■□□□□ 0.52
CASC3-203ENST00000418132 ZFPL1O95159 310 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 CD8BP10966 210 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 S100A5P33763 92 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 FOXB1Q99853 325 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 CENPMQ9NSP4 180 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 FAIMQ9NVQ4 179 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 MED12LQ86YW9 2145 aa18.29■□□□□ 0.52
CASC3-203ENST00000418132 SRSF10O75494 262 aaKnown RBP18.28■□□□□ 0.52
CASC3-203ENST00000418132 KRT33AO76009 404 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 H2BFMP0C1H6 154 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 CCR9P51686 369 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 RPS11P62280 158 aaKnown RBP eCLIP18.28■□□□□ 0.52
CASC3-203ENST00000418132 ACSF3Q4G176 576 aaPredicted RBP18.28■□□□□ 0.52
CASC3-203ENST00000418132 WNT2BQ93097 391 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 C4orf45Q96LM5 186 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 KCNS3Q9BQ31 491 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 KCNN2Q9H2S1 579 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 PEX16Q9Y5Y5 336 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 FREM1Q5H8C1 2179 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 OR4C45A6NMZ5 311 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 ZNF878C9JN71 531 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 RER1O15258 196 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 SERPINA3P01011 423 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 IGHV3-9P01782 118 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 OCM2P0CE71 109 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 OCMP0CE72 109 aaPredicted RBP18.28■□□□□ 0.52
CASC3-203ENST00000418132 CD40LGP29965 261 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 DCTDP32321 178 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 HIST1H3AP68431 136 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 HIST2H3PS2Q5TEC6 136 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 HIST2H3AQ71DI3 136 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 PRSS35Q8N3Z0 413 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 BARHL1Q9BZE3 327 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 PNRC2Q9NPJ4 139 aaKnown RBP18.28■□□□□ 0.52
CASC3-203ENST00000418132 FBXL3Q9UKT7 428 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 ZNF281Q9Y2X9 895 aa18.28■□□□□ 0.52
CASC3-203ENST00000418132 DVL2O14641 736 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 PNPP00491 289 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 GUSBP1Q15486 140 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 NRN1LQ496H8 165 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.27■□□□□ 0.52
CASC3-203ENST00000418132 ZNF100Q8IYN0 542 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 LRRC18Q8N456 261 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 GJC3Q8NFK1 279 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 OR5AK2Q8NH90 309 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 SNTG1Q9NSN8 517 aa18.27■□□□□ 0.52
CASC3-203ENST00000418132 SVILO95425 2214 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 CST2P09228 141 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 KIR3DL2P43630 455 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 GTF3C1Q12789 2109 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 ACSM3Q53FZ2 586 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 YIF1BQ5BJH7 314 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 WDR38Q5JTN6 314 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 OR13C5Q8NGS8 318 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 MED18Q9BUE0 208 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 ETAA1Q9NY74 926 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 DAPK2Q9UIK4 370 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 R4GMQ9 66 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 MED19A0JLT2 244 aaPredicted RBP18.26■□□□□ 0.51
CASC3-203ENST00000418132 TMEM212A6NML5 194 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 ZNF587BE7ETH6 402 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 CTDSP2O14595 271 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 IL1AP01583 271 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 RORCP51449 518 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 MMP16P51512 607 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 PSMD7P51665 324 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 MFGE8Q08431 387 aaPredicted RBP18.26■□□□□ 0.51
CASC3-203ENST00000418132 SF3B4Q15427 424 aaKnown RBP eCLIP18.26■□□□□ 0.512e-18■■□□□ 13.4
CASC3-203ENST00000418132 NSUN5P2Q63ZY6 315 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 CATSPERDQ86XM0 798 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 SLC22A24Q8N4F4 322 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 IL17RDQ8NFM7 739 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 RGP1Q92546 391 aaPredicted RBP18.26■□□□□ 0.51
CASC3-203ENST00000418132 FBXO17Q96EF6 278 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 DDX28Q9NUL7 540 aaKnown RBP18.26■□□□□ 0.51
CASC3-203ENST00000418132 UPB1Q9UBR1 384 aa18.26■□□□□ 0.51
CASC3-203ENST00000418132 MAP1BP46821 2468 aaKnown RBP18.25■□□□□ 0.51
CASC3-203ENST00000418132 TLN1Q9Y490 2541 aaKnown RBP18.25■□□□□ 0.51
CASC3-203ENST00000418132 A0A075B6Q4 140 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 CDRT1O95170 752 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 B4GALT1P15291 398 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 ZNF45Q02386 682 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 ZNF544Q6NX49 715 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 ZNF585AQ6P3V2 769 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 UNQ9370/PRO34162Q6UXP9 181 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 ZNF627Q7L945 461 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 CEACAM19Q7Z692 300 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 PARP16Q8N5Y8 322 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 TPK1Q9H3S4 243 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 NIPAL2Q9H841 368 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 TBCCD1Q9NVR7 557 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 ARHGAP21Q5T5U3 1957 aa18.25■□□□□ 0.51
CASC3-203ENST00000418132 GATBO75879 557 aaKnown RBP18.24■□□□□ 0.51
CASC3-203ENST00000418132 SDC2P34741 201 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 OR3A2P47893 321 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 TDGF1P3P51864 188 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 OXA1LQ15070 435 aa18.24■□□□□ 0.51
CASC3-203ENST00000418132 TRIM16LQ309B1 348 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms